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Page 1
Precious2GPT: the combination of multiomics pretrained transformer and conditional diffusion for artificial multi-omics multi-species multi-tissue sample generation.
Sidorenko D, Pushkov S, Sakip A, Leung GHD, Lok SWY, Urban A, Zagirova D, Veviorskiy A, Tihonova N, Kalashnikov A, Kozlova E, Naumov V, Pun FW, Aliper A, Ren F, Zhavoronkov A. Sidorenko D, et al. Among authors: zagirova d. NPJ Aging. 2024 Aug 8;10(1):37. doi: 10.1038/s41514-024-00163-3. NPJ Aging. 2024. PMID: 39117678 Free PMC article.
Extensive long-range polycomb interactions and weak compartmentalization are hallmarks of human neuronal 3D genome.
Pletenev IA, Bazarevich M, Zagirova DR, Kononkova AD, Cherkasov AV, Efimova OI, Tiukacheva EA, Morozov KV, Ulianov KA, Komkov D, Tvorogova AV, Golimbet VE, Kondratyev NV, Razin SV, Khaitovich P, Ulianov SV, Khrameeva EE. Pletenev IA, et al. Among authors: zagirova dr. Nucleic Acids Res. 2024 Jun 24;52(11):6234-6252. doi: 10.1093/nar/gkae271. Nucleic Acids Res. 2024. PMID: 38647066 Free PMC article.
Precious1GPT: multimodal transformer-based transfer learning for aging clock development and feature importance analysis for aging and age-related disease target discovery.
Urban A, Sidorenko D, Zagirova D, Kozlova E, Kalashnikov A, Pushkov S, Naumov V, Sarkisova V, Leung GHD, Leung HW, Pun FW, Ozerov IV, Aliper A, Ren F, Zhavoronkov A. Urban A, et al. Among authors: zagirova d. Aging (Albany NY). 2023 Jun 13;15(11):4649-4666. doi: 10.18632/aging.204788. Epub 2023 Jun 13. Aging (Albany NY). 2023. PMID: 37315204 Free PMC article.
UBXN2A suppresses the Rictor-mTORC2 signaling pathway, an established tumorigenic pathway in human colorectal cancer.
Sane S, Srinivasan R, Potts RA, Eikanger M, Zagirova D, Freeling J, Reihe CA, Antony RM, Gupta BK, Lynch D, Bleeker J, Turaihi H, Pillatzki A, Zhou W, Luo X, Linnebacher M, Agany D, Zohim EG, Humphrey LE, Black AR, Rezvani K. Sane S, et al. Among authors: zagirova d. Oncogene. 2023 May;42(21):1763-1776. doi: 10.1038/s41388-023-02686-7. Epub 2023 Apr 10. Oncogene. 2023. PMID: 37037900 Free PMC article.
Elimination of LRVs Elicits Different Responses in Leishmania spp.
Saura A, Zakharova A, Klocek D, Gerasimov ES, Butenko A, Macedo DH, Servienė E, Zagirova D, Meshcheryakova A, Rogozin IB, Serva S, Kostygov AY, Yurchenko V. Saura A, et al. Among authors: zagirova d. mSphere. 2022 Aug 31;7(4):e0033522. doi: 10.1128/msphere.00335-22. Epub 2022 Aug 9. mSphere. 2022. PMID: 35943162 Free PMC article.
Leishmania guyanensis M4147 as a new LRV1-bearing model parasite: Phosphatidate phosphatase 2-like protein controls cell cycle progression and intracellular lipid content.
Zakharova A, Albanaz ATS, Opperdoes FR, Škodová-Sveráková I, Zagirova D, Saura A, Chmelová L, Gerasimov ES, Leštinová T, Bečvář T, Sádlová J, Volf P, Lukeš J, Horváth A, Butenko A, Yurchenko V. Zakharova A, et al. Among authors: zagirova d. PLoS Negl Trop Dis. 2022 Jun 24;16(6):e0010510. doi: 10.1371/journal.pntd.0010510. eCollection 2022 Jun. PLoS Negl Trop Dis. 2022. PMID: 35749562 Free PMC article.