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The Brain Tumor Segmentation - Metastases (BraTS-METS) Challenge 2023: Brain Metastasis Segmentation on Pre-treatment MRI.
Moawad AW, Janas A, Baid U, Ramakrishnan D, Saluja R, Ashraf N, Maleki N, Jekel L, Yordanov N, Fehringer P, Gkampenis A, Amiruddin R, Manteghinejad A, Adewole M, Albrecht J, Anazodo U, Aneja S, Anwar SM, Bergquist T, Chiang V, Chung V, Conte GM, Dako F, Eddy J, Ezhov I, Khalili N, Farahani K, Iglesias JE, Jiang Z, Johanson E, Kazerooni AF, Kofler F, Krantchev K, LaBella D, Van Leemput K, Li HB, Linguraru MG, Liu X, Meier Z, Menze BH, Moy H, Osenberg K, Piraud M, Reitman Z, Shinohara RT, Wang C, Wiestler B, Wiggins W, Shafique U, Willms K, Avesta A, Bousabarah K, Chakrabarty S, Gennaro N, Holler W, Kaur M, LaMontagne P, Lin M, Lost J, Marcus DS, Maresca R, Merkaj S, Cassinelli Pedersen G, von Reppert M, Sotiras A, Teytelboym O, Tillmans N, Westerhoff M, Youssef A, Godfrey D, Floyd S, Rauschecker A, Villanueva-Meyer J, Pflüger I, Cho J, Bendszus M, Brugnara G, Cramer J, Perez-Carillo GJG, Johnson DR, Kam A, Kwan BYM, Lai L, Lall NU, Memon F, Krycia M, Patro SN, Petrovic B, So TY, Thompson G, Wu L, Schrickel EB, Bansal A, Barkhof F, Besada C, Chu S, Druzgal J, Dusoi A, Farage L, Feltrin F, Fong A, Fung SH, Gray RI, Ikuta I, Iv M, Postma AA, Mahajan A, Joyner D, Krumpelman C, L… See abstract for full author list ➔ Moawad AW, et al. Among authors: aneja s. ArXiv [Preprint]. 2024 Dec 9:arXiv:2306.00838v3. ArXiv. 2024. PMID: 37396600 Free PMC article. Preprint.
Application of novel PACS-based informatics platform to identify imaging based predictors of CDKN2A allelic status in glioblastomas.
Tillmanns N, Lost J, Tabor J, Vasandani S, Vetsa S, Marianayagam N, Yalcin K, Erson-Omay EZ, von Reppert M, Jekel L, Merkaj S, Ramakrishnan D, Avesta A, de Oliveira Santo ID, Jin L, Huttner A, Bousabarah K, Ikuta I, Lin M, Aneja S, Turowski B, Aboian M, Moliterno J. Tillmanns N, et al. Among authors: aneja s. Sci Rep. 2023 Dec 22;13(1):22942. doi: 10.1038/s41598-023-48918-4. Sci Rep. 2023. PMID: 38135704 Free PMC article.
Comparison of volumetric and 2D-based response methods in the PNOC-001 pediatric low-grade glioma clinical trial.
von Reppert M, Ramakrishnan D, Brüningk SC, Memon F, Abi Fadel S, Maleki N, Bahar R, Avesta AE, Jekel L, Sala M, Lost J, Tillmanns N, Kaur M, Aneja S, Fathi Kazerooni A, Nabavizadeh A, Lin M, Hoffmann KT, Bousabarah K, Swanson KR, Haas-Kogan D, Mueller S, Aboian MS. von Reppert M, et al. Among authors: aneja s. Neurooncol Adv. 2023 Dec 27;6(1):vdad172. doi: 10.1093/noajnl/vdad172. eCollection 2024 Jan-Dec. Neurooncol Adv. 2023. PMID: 38221978 Free PMC article.
Enhancing clinical decision-making: An externally validated machine learning model for predicting isocitrate dehydrogenase mutation in gliomas using radiomics from presurgical magnetic resonance imaging.
Lost J, Ashraf N, Jekel L, von Reppert M, Tillmanns N, Willms K, Merkaj S, Petersen GC, Avesta A, Ramakrishnan D, Omuro A, Nabavizadeh A, Bakas S, Bousabarah K, Lin M, Aneja S, Sabel M, Aboian M. Lost J, et al. Among authors: aneja s. Neurooncol Adv. 2024 Oct 3;6(1):vdae157. doi: 10.1093/noajnl/vdae157. eCollection 2024 Jan-Dec. Neurooncol Adv. 2024. PMID: 39659829 Free PMC article.
A Large Open Access Dataset of Brain Metastasis 3D Segmentations with Clinical and Imaging Feature Information.
Ramakrishnan D, Jekel L, Chadha S, Janas A, Moy H, Maleki N, Sala M, Kaur M, Petersen GC, Merkaj S, von Reppert M, Baid U, Bakas S, Kirsch C, Davis M, Bousabarah K, Holler W, Lin M, Westerhoff M, Aneja S, Memon F, Aboian MS. Ramakrishnan D, et al. Among authors: aneja s. ArXiv [Preprint]. 2023 Sep 12:arXiv:2309.05053v2. ArXiv. 2023. Update in: Sci Data. 2024 Feb 29;11(1):254. doi: 10.1038/s41597-024-03021-9 PMID: 37744461 Free PMC article. Updated. Preprint.
Validating International Classification of Diseases Code 10th Revision algorithms for accurate identification of pulmonary embolism.
Bikdeli B, Khairani CD, Bejjani A, Lo YC, Mahajan S, Caraballo C, Jimenez JV, Krishnathasan D, Zarghami M, Rashedi S, Jimenez D, Barco S, Secemsky EA, Klok FA, Hunsaker AR, Aghayev A, Muriel A, Hussain MA, Appah-Sampong A, Lu Y, Lin Z, Mojibian H, Aneja S, Khera R, Konstantinides S, Goldhaber SZ, Wang L, Zhou L, Monreal M, Piazza G, Krumholz HM; PE-EHR+ Investigators. Bikdeli B, et al. Among authors: aneja s. J Thromb Haemost. 2024 Nov 4:S1538-7836(24)00620-2. doi: 10.1016/j.jtha.2024.10.013. Online ahead of print. J Thromb Haemost. 2024. PMID: 39505153
Screening for extranodal extension in HPV-associated oropharyngeal carcinoma: evaluation of a CT-based deep learning algorithm in patient data from a multicentre, randomised de-escalation trial.
Kann BH, Likitlersuang J, Bontempi D, Ye Z, Aneja S, Bakst R, Kelly HR, Juliano AF, Payabvash S, Guenette JP, Uppaluri R, Margalit DN, Schoenfeld JD, Tishler RB, Haddad R, Aerts HJWL, Garcia JJ, Flamand Y, Subramaniam RM, Burtness BA, Ferris RL. Kann BH, et al. Among authors: aneja s. Lancet Digit Health. 2023 Jun;5(6):e360-e369. doi: 10.1016/S2589-7500(23)00046-8. Epub 2023 Apr 21. Lancet Digit Health. 2023. PMID: 37087370 Free PMC article. Clinical Trial.
A large open access dataset of brain metastasis 3D segmentations on MRI with clinical and imaging information.
Ramakrishnan D, Jekel L, Chadha S, Janas A, Moy H, Maleki N, Sala M, Kaur M, Petersen GC, Merkaj S, von Reppert M, Baid U, Bakas S, Kirsch C, Davis M, Bousabarah K, Holler W, Lin M, Westerhoff M, Aneja S, Memon F, Aboian MS. Ramakrishnan D, et al. Among authors: aneja s. Sci Data. 2024 Feb 29;11(1):254. doi: 10.1038/s41597-024-03021-9. Sci Data. 2024. PMID: 38424079 Free PMC article.
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