Allard MW - Search Results

1

Enterobacterales draft genome sequences: 15 historical (1998-2004) and 30 contemporary (2015-2016) clinical isolates from Pakistan.

Crawford MA, Lascols C, Lomonaco S, Timme RE, Fisher DJ, Anderson K, Hodge DR, Morse SA, Pillai SP, Sharma SK, Khan E, Allard MW, Hughes MA. Crawford MA, et al. Among authors: allard mw. Microbiol Resour Announc. 2023 Sep 19;12(9):e0016323. doi: 10.1128/MRA.00163-23. Epub 2023 Jul 28. Microbiol Resour Announc. 2023. PMID: 37504519 Free PMC article.

2

SARS-CoV-2 wastewater variant surveillance: pandemic response leveraging FDA's GenomeTrakr network.

Timme RE, Woods J, Jones JL, Calci KR, Rodriguez R, Barnes C, Leard E, Craven M, Chen H, Boerner C, Grim C, Windsor AM, Ramachandran P, Muruvanda T, Rand H, Tesfaldet B, Amirzadegan J, Kayikcioglu T, Walsky T, Allard M, Balkey M, Bias CH, Brown E, Judy K, Pfefer T, Tallent SM, Hoffmann M; GenomeTrakr Laboratory consortium; Pettengill J. Timme RE, et al. mSystems. 2024 Jun 18;9(6):e0141523. doi: 10.1128/msystems.01415-23. Epub 2024 May 31. mSystems. 2024. PMID: 38819130 Free PMC article.

3

A Comprehensive Guide to Quality Assessment and Data Submission for Genomic Surveillance of Enteric Pathogens.

Timme RE, Pfefer T, Bias CH, Allard MW, Huang X, Strain E, Balkey M. Timme RE, et al. Among authors: allard mw. Methods Mol Biol. 2025;2852:199-209. doi: 10.1007/978-1-0716-4100-2_14. Methods Mol Biol. 2025. PMID: 39235746

4

The rare Salmonella enterica serovar Isangi: genomic characterization of the antimicrobial resistance, virulence potential and epidemiology of Brazilian strains in comparison to global isolates.

Vilela FP, Rodrigues DDP, Allard MW, Falcão JP. Vilela FP, et al. Among authors: allard mw. J Med Microbiol. 2023 Jul;72(7). doi: 10.1099/jmm.0.001736. J Med Microbiol. 2023. PMID: 37462464

5

Prevalence and whole-genome sequencing characterization of Salmonella in urban karst groundwater and predominantly groundwater-fed surface waters for serotypes and antimicrobial resistance.

Agga GE, Kaiser R, Polk J, Allard M. Agga GE, et al. J Environ Qual. 2023 May-Jun;52(3):691-705. doi: 10.1002/jeq2.20470. Epub 2023 Mar 24. J Environ Qual. 2023. PMID: 36852718

6

Precision metagenomics sequencing for food safety: hybrid assembly of Shiga toxin-producing Escherichia coli in enriched agricultural water.

Maguire M, Ramachandran P, Tallent S, Mammel MK, Brown EW, Allard MW, Musser SM, González-Escalona N. Maguire M, et al. Among authors: allard mw. Front Microbiol. 2023 Aug 31;14:1221668. doi: 10.3389/fmicb.2023.1221668. eCollection 2023. Front Microbiol. 2023. PMID: 37720160 Free PMC article.

7

Genomic analyses of drug-resistant Salmonella enterica serovar Heidelberg strains isolated from meat and related sources between 2013 and 2017 in the south region of Brazil.

Vilela FP, Dos Prazeres Rodrigues D, Allard MW, Falcão JP. Vilela FP, et al. Among authors: allard mw. Curr Genet. 2023 Jun;69(2-3):141-152. doi: 10.1007/s00294-023-01264-4. Epub 2023 Mar 15. Curr Genet. 2023. PMID: 36920496

8

Prevalence of efflux pump and heavy metal tolerance encoding genes among Salmonella enterica serovar Infantis strains from diverse sources in Brazil.

Vilela FP, Rodrigues DDP, Allard MW, Falcão JP. Vilela FP, et al. Among authors: allard mw. PLoS One. 2022 Nov 22;17(11):e0277979. doi: 10.1371/journal.pone.0277979. eCollection 2022. PLoS One. 2022. PMID: 36413564 Free PMC article.

9

Whole genome sequence datasets of Salmonella enterica serovar Saintpaul ST50 and serovar Worthington ST592 strains isolated from raw milk in Brazil.

Leite EL, Saraiva MMS, Vasconcelos PC, Monte DFM, Allard MW, Givisiez PEN, Gebreyes WA, Freitas Neto OC, Oliveira CJB. Leite EL, et al. Among authors: allard mw. Data Brief. 2024 Jan 4;53:109965. doi: 10.1016/j.dib.2023.109965. eCollection 2024 Apr. Data Brief. 2024. PMID: 38425878 Free PMC article.

10

Insights into the genomic traits of Yersinia frederiksenii, Yersinia intermedia and Yersinia kristensenii isolated from diverse sources in Brazil.

Vilela FP, Imori PFM, Allard MW, Falcão JP. Vilela FP, et al. Among authors: allard mw. Antonie Van Leeuwenhoek. 2024 Jun 3;117(1):86. doi: 10.1007/s10482-024-01984-8. Antonie Van Leeuwenhoek. 2024. PMID: 38829455

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