Mishra SK - Search Results

1

Docking and Molecular Dynamics Simulations Clarify Binding Sites for Interactions of Novel Marine Sulfated Glycans with SARS-CoV-2 Spike Glycoprotein.

Samanta P, Mishra SK, Pomin VH, Doerksen RJ. Samanta P, et al. Among authors: mishra sk. Molecules. 2023 Sep 3;28(17):6413. doi: 10.3390/molecules28176413. Molecules. 2023. PMID: 37687244 Free PMC article.

2

Structural and kinetic analyses of holothurian sulfated glycans suggest potential treatment for SARS-CoV-2 infection.

Dwivedi R, Samanta P, Sharma P, Zhang F, Mishra SK, Kucheryavy P, Kim SB, Aderibigbe AO, Linhardt RJ, Tandon R, Doerksen RJ, Pomin VH. Dwivedi R, et al. Among authors: mishra sk. J Biol Chem. 2021 Oct;297(4):101207. doi: 10.1016/j.jbc.2021.101207. Epub 2021 Sep 17. J Biol Chem. 2021. PMID: 34537241 Free PMC article.

3

Comparison of Conformational Analyses of Naturally Occurring Flavonoid-O-Glycosides with Unnatural Flavonoid-CF₂-Glycosides Using Molecular Modeling.

Alkhodier RA, Mishra SK, Doerksen RJ, Colby DA. Alkhodier RA, et al. Among authors: mishra sk. J Chem Inf Model. 2023 Jan 9;63(1):375-386. doi: 10.1021/acs.jcim.2c01147. Epub 2022 Dec 13. J Chem Inf Model. 2023. PMID: 36512328 Free PMC article.

4

Structure-based design of UDP-GlcNAc analogs as candidate GnT-V inhibitors.

Vibhute AM, Tanaka HN, Mishra SK, Osuka RF, Nagae M, Yonekawa C, Korekane H, Doerksen RJ, Ando H, Kizuka Y. Vibhute AM, et al. Among authors: mishra sk. Biochim Biophys Acta Gen Subj. 2022 Jun;1866(6):130118. doi: 10.1016/j.bbagen.2022.130118. Epub 2022 Mar 4. Biochim Biophys Acta Gen Subj. 2022. PMID: 35248671 Free PMC article.

5

Validated determination of NRG1 Ig-like domain structure by mass spectrometry coupled with computational modeling.

Khaje NA, Eletsky A, Biehn SE, Mobley CK, Rogals MJ, Kim Y, Mishra SK, Doerksen RJ, Lindert S, Prestegard JH, Sharp JS. Khaje NA, et al. Among authors: mishra sk. Commun Biol. 2022 May 12;5(1):452. doi: 10.1038/s42003-022-03411-y. Commun Biol. 2022. PMID: 35551273 Free PMC article.

6

Discovery of a lectin domain that regulates enzyme activity in mouse N-acetylglucosaminyltransferase-IVa (MGAT4A).

Nagae M, Hirata T, Tateno H, Mishra SK, Manabe N, Osada N, Tokoro Y, Yamaguchi Y, Doerksen RJ, Shimizu T, Kizuka Y. Nagae M, et al. Among authors: mishra sk. Commun Biol. 2022 Jul 19;5(1):695. doi: 10.1038/s42003-022-03661-w. Commun Biol. 2022. PMID: 35854001 Free PMC article.

7

ROS-Responsive Glycopolymeric Nanoparticles for Enhanced Drug Delivery to Macrophages.

Shofolawe-Bakare OT, de Mel JU, Mishra SK, Hossain M, Hamadani CM, Pride MC, Dasanayake GS, Monroe W, Roth EW, Tanner EEL, Doerksen RJ, Smith AE, Werfel TA. Shofolawe-Bakare OT, et al. Among authors: mishra sk. Macromol Biosci. 2022 Dec;22(12):e2200281. doi: 10.1002/mabi.202200281. Epub 2022 Sep 28. Macromol Biosci. 2022. PMID: 36125638 Free PMC article.

8

Tissue-Specific Regulation of HNK-1 Biosynthesis by Bisecting GlcNAc.

Kawade H, Morise J, Mishra SK, Tsujioka S, Oka S, Kizuka Y. Kawade H, et al. Among authors: mishra sk. Molecules. 2021 Aug 26;26(17):5176. doi: 10.3390/molecules26175176. Molecules. 2021. PMID: 34500611 Free PMC article.

9

Pick's Tau Fibril Shows Multiple Distinct PET Probe Binding Sites: Insights from Computational Modelling.

Mishra SK, Yamaguchi Y, Higuchi M, Sahara N. Mishra SK, et al. Int J Mol Sci. 2020 Dec 31;22(1):349. doi: 10.3390/ijms22010349. Int J Mol Sci. 2020. PMID: 33396273 Free PMC article.

10

Evaluation of Selected Classical Force Fields for Alchemical Binding Free Energy Calculations of Protein-Carbohydrate Complexes.

Mishra SK, Calabró G, Loeffler HH, Michel J, Koča J. Mishra SK, et al. J Chem Theory Comput. 2015 Jul 14;11(7):3333-45. doi: 10.1021/acs.jctc.5b00159. Epub 2015 Jul 2. J Chem Theory Comput. 2015. PMID: 26575767 Free article.

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