Pique-Regi R - Search Results

1

Single nucleus transcriptomics of ventral midbrain identifies glial activation associated with chronic opioid use disorder.

Wei J, Lambert TY, Valada A, Patel N, Walker K, Lenders J, Schmidt CJ, Iskhakova M, Alazizi A, Mair-Meijers H, Mash DC, Luca F, Pique-Regi R, Bannon MJ, Akbarian S. Wei J, et al. Among authors: pique regi r. Nat Commun. 2023 Sep 12;14(1):5610. doi: 10.1038/s41467-023-41455-8. Nat Commun. 2023. PMID: 37699936 Free PMC article.

2

Copy number variation signature to predict human ancestry.

Pronold M, Vali M, Pique-Regi R, Asgharzadeh S. Pronold M, et al. BMC Bioinformatics. 2012 Dec 27;13:336. doi: 10.1186/1471-2105-13-336. BMC Bioinformatics. 2012. PMID: 23270563 Free PMC article.

3

Bioinformatics for copy number variation data.

Warden M, Pique-Regi R, Ortega A, Asgharzadeh S. Warden M, et al. Methods Mol Biol. 2011;719:235-49. doi: 10.1007/978-1-61779-027-0_11. Methods Mol Biol. 2011. PMID: 21370087

4

Dissecting the regulatory architecture of gene expression QTLs.

Gaffney DJ, Veyrieras JB, Degner JF, Pique-Regi R, Pai AA, Crawford GE, Stephens M, Gilad Y, Pritchard JK. Gaffney DJ, et al. Genome Biol. 2012 Jan 31;13(1):R7. doi: 10.1186/gb-2012-13-1-r7. Genome Biol. 2012. PMID: 22293038 Free PMC article.

5

DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines.

Bell JT, Pai AA, Pickrell JK, Gaffney DJ, Pique-Regi R, Degner JF, Gilad Y, Pritchard JK. Bell JT, et al. Genome Biol. 2011;12(1):R10. doi: 10.1186/gb-2011-12-1-r10. Epub 2011 Jan 20. Genome Biol. 2011. PMID: 21251332 Free PMC article.

6

Clinical significance of tumor-associated inflammatory cells in metastatic neuroblastoma.

Asgharzadeh S, Salo JA, Ji L, Oberthuer A, Fischer M, Berthold F, Hadjidaniel M, Liu CW, Metelitsa LS, Pique-Regi R, Wakamatsu P, Villablanca JG, Kreissman SG, Matthay KK, Shimada H, London WB, Sposto R, Seeger RC. Asgharzadeh S, et al. J Clin Oncol. 2012 Oct 1;30(28):3525-32. doi: 10.1200/JCO.2011.40.9169. Epub 2012 Aug 27. J Clin Oncol. 2012. PMID: 22927533 Free PMC article.

7

Copy number variation in the Framingham Heart Study.

Shtir C, Pique-Regi R, Siegmund K, Morrison J, Schumacher F, Marjoram P. Shtir C, et al. BMC Proc. 2009 Dec 15;3 Suppl 7(Suppl 7):S133. doi: 10.1186/1753-6561-3-s7-s133. BMC Proc. 2009. PMID: 20018000 Free PMC article.

8

Sparse representation and Bayesian detection of genome copy number alterations from microarray data.

Pique-Regi R, Monso-Varona J, Ortega A, Seeger RC, Triche TJ, Asgharzadeh S. Pique-Regi R, et al. Bioinformatics. 2008 Feb 1;24(3):309-18. doi: 10.1093/bioinformatics/btm601. Epub 2008 Jan 18. Bioinformatics. 2008. PMID: 18203770 Free PMC article.

9

Accurate inference of transcription factor binding from DNA sequence and chromatin accessibility data.

Pique-Regi R, Degner JF, Pai AA, Gaffney DJ, Gilad Y, Pritchard JK. Pique-Regi R, et al. Genome Res. 2011 Mar;21(3):447-55. doi: 10.1101/gr.112623.110. Epub 2010 Nov 24. Genome Res. 2011. PMID: 21106904 Free PMC article.

10

Model selection and Bayesian methods in statistical genetics: summary of group 11 contributions to Genetic Analysis Workshop 15.

Swartz MD, Thomas DC, Daw EW, Albers K, Charlesworth JC, Dyer TC, Fridley BL, Govil M, Kraft P, Kwon S, Logue MW, Oh C, Pique-Regi R, Saba L, Schumacher FR, Uh HW. Swartz MD, et al. Genet Epidemiol. 2007;31 Suppl 1:S96-102. doi: 10.1002/gepi.20285. Genet Epidemiol. 2007. PMID: 18046760 Review.

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