Johnson MG - Search Results

1

Frequent allopolyploidy with distant progenitors in the moss genera Physcomitrium and Entosthodon (Funariaceae) identified via subgenome phasing of targeted nuclear genes.

Patel N, Medina R, Williams LD, Lemieux O, Goffinet B, Johnson MG. Patel N, et al. Among authors: johnson mg. Evolution. 2023 Dec 2;77(12):2561-2575. doi: 10.1093/evolut/qpad171. Evolution. 2023. PMID: 37740404

2

A phylotranscriptomic analysis of gene family expansion and evolution in the largest order of pleurocarpous mosses (Hypnales, Bryophyta).

Johnson MG, Malley C, Goffinet B, Shaw AJ, Wickett NJ. Johnson MG, et al. Mol Phylogenet Evol. 2016 May;98:29-40. doi: 10.1016/j.ympev.2016.01.008. Epub 2016 Jan 23. Mol Phylogenet Evol. 2016. PMID: 26811877

3

HybPiper: Extracting coding sequence and introns for phylogenetics from high-throughput sequencing reads using target enrichment.

Johnson MG, Gardner EM, Liu Y, Medina R, Goffinet B, Shaw AJ, Zerega NJ, Wickett NJ. Johnson MG, et al. Appl Plant Sci. 2016 Jul 12;4(7):apps.1600016. doi: 10.3732/apps.1600016. eCollection 2016 Jul. Appl Plant Sci. 2016. PMID: 27437175 Free PMC article.

4

Evolutionary dynamism in bryophytes: Phylogenomic inferences confirm rapid radiation in the moss family Funariaceae.

Medina R, Johnson M, Liu Y, Wilding N, Hedderson TA, Wickett N, Goffinet B. Medina R, et al. Mol Phylogenet Evol. 2018 Mar;120:240-247. doi: 10.1016/j.ympev.2017.12.002. Epub 2017 Dec 5. Mol Phylogenet Evol. 2018. PMID: 29222063

5

Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes.

Liu Y, Johnson MG, Cox CJ, Medina R, Devos N, Vanderpoorten A, Hedenäs L, Bell NE, Shevock JR, Aguero B, Quandt D, Wickett NJ, Shaw AJ, Goffinet B. Liu Y, et al. Among authors: johnson mg. Nat Commun. 2019 Apr 2;10(1):1485. doi: 10.1038/s41467-019-09454-w. Nat Commun. 2019. PMID: 30940807 Free PMC article.

6

On the potential of Angiosperms353 for population genomic studies.

Slimp M, Williams LD, Hale H, Johnson MG. Slimp M, et al. Among authors: johnson mg. Appl Plant Sci. 2021 May 18;9(7):10.1002/aps3.11419. doi: 10.1002/aps3.11419. eCollection 2021 Jul. Appl Plant Sci. 2021. PMID: 34336401 Free PMC article.

7

A phylogeny of the evening primrose family (Onagraceae) using a target enrichment approach with 303 nuclear loci.

Overson RP, Johnson MG, Bechen LL, Kinosian SP, Douglas NA, Fant JB, Hoch PC, Levin RA, Moore MJ, Raguso RA, Wagner WL, Skogen KA, Wickett NJ. Overson RP, et al. Among authors: johnson mg. BMC Ecol Evol. 2023 Nov 17;23(1):66. doi: 10.1186/s12862-023-02151-9. BMC Ecol Evol. 2023. PMID: 37974080 Free PMC article.

8

Allele phasing has minimal impact on phylogenetic reconstruction from targeted nuclear gene sequences in a case study of Artocarpus.

Kates HR, Johnson MG, Gardner EM, Zerega NJC, Wickett NJ. Kates HR, et al. Among authors: johnson mg. Am J Bot. 2018 Mar;105(3):404-416. doi: 10.1002/ajb2.1068. Epub 2018 May 5. Am J Bot. 2018. PMID: 29729187 Free article.

9

Target sequence capture of nuclear-encoded genes for phylogenetic analysis in ferns.

Wolf PG, Robison TA, Johnson MG, Sundue MA, Testo WL, Rothfels CJ. Wolf PG, et al. Among authors: johnson mg. Appl Plant Sci. 2018 May 17;6(5):e01148. doi: 10.1002/aps3.1148. eCollection 2018 May. Appl Plant Sci. 2018. PMID: 30131890 Free PMC article.

10

Evolution of niche preference in Sphagnum peat mosses.

Johnson MG, Granath G, Tahvanainen T, Pouliot R, Stenøien HK, Rochefort L, Rydin H, Shaw AJ. Johnson MG, et al. Evolution. 2015 Jan;69(1):90-103. doi: 10.1111/evo.12547. Epub 2014 Dec 16. Evolution. 2015. PMID: 25319183

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