Nguyen Q - Search Results

1

A spatially mapped gene expression signature for intestinal stem-like cells identifies high-risk precursors of gastric cancer.

Huang RJ, Wichmann IA, Su A, Sathe A, Shum MV, Grimes SM, Meka R, Almeda A, Bai X, Shen J, Nguyen Q, Amieva MR, Hwang JH, Ji HP. Huang RJ, et al. Among authors: nguyen q. bioRxiv [Preprint]. 2023 Sep 22:2023.09.20.558462. doi: 10.1101/2023.09.20.558462. bioRxiv. 2023. PMID: 37786704 Free PMC article. Preprint.

2

SpaCell: integrating tissue morphology and spatial gene expression to predict disease cells.

Tan X, Su A, Tran M, Nguyen Q. Tan X, et al. Among authors: nguyen q. Bioinformatics. 2020 Apr 1;36(7):2293-2294. doi: 10.1093/bioinformatics/btz914. Bioinformatics. 2020. PMID: 31808789

3

scPred: accurate supervised method for cell-type classification from single-cell RNA-seq data.

Alquicira-Hernandez J, Sathe A, Ji HP, Nguyen Q, Powell JE. Alquicira-Hernandez J, et al. Among authors: nguyen q. Genome Biol. 2019 Dec 12;20(1):264. doi: 10.1186/s13059-019-1862-5. Genome Biol. 2019. PMID: 31829268 Free PMC article.

4

Applying Machine Learning for Integration of Multi-Modal Genomics Data and Imaging Data to Quantify Heterogeneity in Tumour Tissues.

Tan X, Su AT, Hajiabadi H, Tran M, Nguyen Q. Tan X, et al. Among authors: nguyen q. Methods Mol Biol. 2021;2190:209-228. doi: 10.1007/978-1-0716-0826-5_10. Methods Mol Biol. 2021. PMID: 32804368 Review.

5

A deep learning model for molecular label transfer that enables cancer cell identification from histopathology images.

Su A, Lee H, Tan X, Suarez CJ, Andor N, Nguyen Q, Ji HP. Su A, et al. Among authors: nguyen q. NPJ Precis Oncol. 2022 Mar 2;6(1):14. doi: 10.1038/s41698-022-00252-0. NPJ Precis Oncol. 2022. PMID: 35236916 Free PMC article.

6

Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1+ Macrophages and Fibroblasts.

Sathe A, Mason K, Grimes SM, Zhou Z, Lau BT, Bai X, Su A, Tan X, Lee H, Suarez CJ, Nguyen Q, Poultsides G, Zhang NR, Ji HP. Sathe A, et al. Among authors: nguyen q. Clin Cancer Res. 2023 Jan 4;29(1):244-260. doi: 10.1158/1078-0432.CCR-22-2041. Clin Cancer Res. 2023. PMID: 36239989 Free PMC article.

7

The single-cell spatial landscape of stage III colorectal cancers.

Su A, Lee H, Tran M, Cruz RD, Sathe A, Bai X, Wichmann I, Pflieger L, Moulton B, Barker T, Haslem D, Jones D, Nadauld L, Nguyen Q, Ji HP, Rhodes T. Su A, et al. Among authors: nguyen q. bioRxiv [Preprint]. 2024 Nov 11:2024.11.07.622577. doi: 10.1101/2024.11.07.622577. bioRxiv. 2024. PMID: 39605367 Free PMC article. Preprint.

8

Single cell eQTL analysis identifies cell type-specific genetic control of gene expression in fibroblasts and reprogrammed induced pluripotent stem cells.

Neavin D, Nguyen Q, Daniszewski MS, Liang HH, Chiu HS, Wee YK, Senabouth A, Lukowski SW, Crombie DE, Lidgerwood GE, Hernández D, Vickers JC, Cook AL, Palpant NJ, Pébay A, Hewitt AW, Powell JE. Neavin D, et al. Among authors: nguyen q. Genome Biol. 2021 Mar 5;22(1):76. doi: 10.1186/s13059-021-02293-3. Genome Biol. 2021. PMID: 33673841 Free PMC article.

9

Single-cell RNA-seq of human induced pluripotent stem cells reveals cellular heterogeneity and cell state transitions between subpopulations.

Nguyen QH, Lukowski SW, Chiu HS, Senabouth A, Bruxner TJC, Christ AN, Palpant NJ, Powell JE. Nguyen QH, et al. Genome Res. 2018 Jul;28(7):1053-1066. doi: 10.1101/gr.223925.117. Epub 2018 May 11. Genome Res. 2018. PMID: 29752298 Free PMC article.

10

Spatially Resolved Transcriptomes of Mammalian Kidneys Illustrate the Molecular Complexity and Interactions of Functional Nephron Segments.

Raghubar AM, Pham DT, Tan X, Grice LF, Crawford J, Lam PY, Andersen SB, Yoon S, Teoh SM, Matigian NA, Stewart A, Francis L, Ng MSY, Healy HG, Combes AN, Kassianos AJ, Nguyen Q, Mallett AJ. Raghubar AM, et al. Among authors: nguyen q. Front Med (Lausanne). 2022 Jul 7;9:873923. doi: 10.3389/fmed.2022.873923. eCollection 2022. Front Med (Lausanne). 2022. PMID: 35872784 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

2,998 results

Search Page

Filters