Romero-Severson EO - Search Results

1

Modeling the evolution of segment trees reveals deficiencies in current inferential methods for genomic reassortment.

Lin Q, Goldberg EE, Leitner T, Molina-París C, King AA, Romero-Severson EO. Lin Q, et al. Among authors: romero severson eo. bioRxiv [Preprint]. 2023 Sep 22:2023.09.20.558687. doi: 10.1101/2023.09.20.558687. bioRxiv. 2023. PMID: 37790507 Free PMC article. Preprint.

2

Timing and order of transmission events is not directly reflected in a pathogen phylogeny.

Romero-Severson E, Skar H, Bulla I, Albert J, Leitner T. Romero-Severson E, et al. Mol Biol Evol. 2014 Sep;31(9):2472-82. doi: 10.1093/molbev/msu179. Epub 2014 May 29. Mol Biol Evol. 2014. PMID: 24874208 Free PMC article.

3

Trends of HIV-1 incidence with credible intervals in Sweden 2002-09 reconstructed using a dynamic model of within-patient IgG growth.

Romero-Severson EO, Lee Petrie C, Ionides E, Albert J, Leitner T. Romero-Severson EO, et al. Int J Epidemiol. 2015 Jun;44(3):998-1006. doi: 10.1093/ije/dyv034. Epub 2015 Jul 10. Int J Epidemiol. 2015. PMID: 26163684 Free PMC article.

4

Recombination Enhances HIV-1 Envelope Diversity by Facilitating the Survival of Latent Genomic Fragments in the Plasma Virus Population.

Immonen TT, Conway JM, Romero-Severson EO, Perelson AS, Leitner T. Immonen TT, et al. PLoS Comput Biol. 2015 Dec 22;11(12):e1004625. doi: 10.1371/journal.pcbi.1004625. eCollection 2015 Dec. PLoS Comput Biol. 2015. PMID: 26693708 Free PMC article.

5

Phylogenetically resolving epidemiologic linkage.

Romero-Severson EO, Bulla I, Leitner T. Romero-Severson EO, et al. Proc Natl Acad Sci U S A. 2016 Mar 8;113(10):2690-5. doi: 10.1073/pnas.1522930113. Epub 2016 Feb 22. Proc Natl Acad Sci U S A. 2016. PMID: 26903617 Free PMC article.

6

Inference of Transmission Network Structure from HIV Phylogenetic Trees.

Giardina F, Romero-Severson EO, Albert J, Britton T, Leitner T. Giardina F, et al. PLoS Comput Biol. 2017 Jan 13;13(1):e1005316. doi: 10.1371/journal.pcbi.1005316. eCollection 2017 Jan. PLoS Comput Biol. 2017. PMID: 28085876 Free PMC article.

7

Phylodynamic Inference across Epidemic Scales.

Volz EM, Romero-Severson E, Leitner T. Volz EM, et al. Mol Biol Evol. 2017 May 1;34(5):1276-1288. doi: 10.1093/molbev/msx077. Mol Biol Evol. 2017. PMID: 28204593 Free PMC article.

8

Phylogenetic patterns recover known HIV epidemiological relationships and reveal common transmission of multiple variants.

Leitner T, Romero-Severson E. Leitner T, et al. Nat Microbiol. 2018 Sep;3(9):983-988. doi: 10.1038/s41564-018-0204-9. Epub 2018 Jul 30. Nat Microbiol. 2018. PMID: 30061758 Free PMC article.

9

Accidental Father-to-Son HIV-1 Transmission During the Seroconversion Period.

Ezeonwumelu I, Bártolo I, Martin F, Abecasis A, Campos T, Romero-Severson EO, Leitner T, Taveira N. Ezeonwumelu I, et al. AIDS Res Hum Retroviruses. 2018 Oct;34(10):857-862. doi: 10.1089/AID.2018.0060. Epub 2018 Sep 20. AIDS Res Hum Retroviruses. 2018. PMID: 30073842 Free PMC article.

10

What Should Health Departments Do with HIV Sequence Data?

Romero-Severson E, Nasir A, Leitner T. Romero-Severson E, et al. Viruses. 2020 Sep 12;12(9):1018. doi: 10.3390/v12091018. Viruses. 2020. PMID: 32932642 Free PMC article.

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