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Page 1
Unraveling the functional dark matter through global metagenomics.
Pavlopoulos GA, Baltoumas FA, Liu S, Selvitopi O, Camargo AP, Nayfach S, Azad A, Roux S, Call L, Ivanova NN, Chen IM, Paez-Espino D, Karatzas E; Novel Metagenome Protein Families Consortium; Iliopoulos I, Konstantinidis K, Tiedje JM, Pett-Ridge J, Baker D, Visel A, Ouzounis CA, Ovchinnikov S, Buluç A, Kyrpides NC. Pavlopoulos GA, et al. Among authors: chen im. Nature. 2023 Oct;622(7983):594-602. doi: 10.1038/s41586-023-06583-7. Epub 2023 Oct 11. Nature. 2023. PMID: 37821698 Free PMC article.
Expansion of the global RNA virome reveals diverse clades of bacteriophages.
Neri U, Wolf YI, Roux S, Camargo AP, Lee B, Kazlauskas D, Chen IM, Ivanova N, Zeigler Allen L, Paez-Espino D, Bryant DA, Bhaya D; RNA Virus Discovery Consortium; Krupovic M, Dolja VV, Kyrpides NC, Koonin EV, Gophna U. Neri U, et al. Among authors: chen im. Cell. 2022 Oct 13;185(21):4023-4037.e18. doi: 10.1016/j.cell.2022.08.023. Epub 2022 Sep 28. Cell. 2022. PMID: 36174579 Free article.
Reply to: Accurate Determinants of Outcome in ALL.
Chang TC, Chen W, Qu C, Cheng Z, Elsayed A, Pounds SB, Shago M, Rabin KR, Raetz EA, Devidas M, Cheng C, Angiolillo A, Baviskar P, Borowitz M, Burke MJ, Carroll A, Carroll WL, Chen IM, Harvey R, Heerema N, Iacobucci I, Wang JR, Jeha S, Larsen E, Mattano L, Maloney K, Pui CH, Ramirez NC, Salzer W, Willman C, Winick N, Wood B, Hunger SP, Wu G, Mullighan CG, Loh ML. Chang TC, et al. Among authors: chen im. J Clin Oncol. 2024 Dec 23:JCO2402335. doi: 10.1200/JCO-24-02335. Online ahead of print. J Clin Oncol. 2024. PMID: 39715469 No abstract available.
The antitumor activity of TGFβ-specific T cells is dependent on IL-6 signaling.
Perez-Penco M, Byrdal M, Lara de la Torre L, Ballester M, Khan S, Siersbæk M, Lecoq I, Madsen CO, Kjeldsen JW, Svane IM, Hansen M, Donia M, Johansen JS, Olsen LR, Grøntved L, Chen IM, Arnes L, Holmström MO, Andersen MH. Perez-Penco M, et al. Among authors: chen im. Cell Mol Immunol. 2024 Dec 9. doi: 10.1038/s41423-024-01238-7. Online ahead of print. Cell Mol Immunol. 2024. PMID: 39653766
Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days.
Nunn BL, Timmins-Schiffman E, Mudge MC, Plubell DL, Chebli G, Kubanek J, Riffle M, Noble WS, Harvey E, Nunn TA, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen IA, Ivanova NN, Kyrpides NC, Glavina Del Rio T, Eloe-Fadrosh EA. Nunn BL, et al. Sci Data. 2024 Nov 22;11(1):1270. doi: 10.1038/s41597-024-04013-5. Sci Data. 2024. PMID: 39578464 Free PMC article.
Genomes OnLine Database (GOLD) v.10: new features and updates.
Mukherjee S, Stamatis D, Li CT, Ovchinnikova G, Kandimalla M, Handke V, Reddy A, Ivanova N, Woyke T, Eloe-Fardosh EA, Chen IA, Kyrpides NC, Reddy TBK. Mukherjee S, et al. Nucleic Acids Res. 2024 Nov 5:gkae1000. doi: 10.1093/nar/gkae1000. Online ahead of print. Nucleic Acids Res. 2024. PMID: 39498478
Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days.
Nunn BL, Timmins-Schiffman E, Mudge MC, Plubell D, Chebli G, Kubanek J, Riffle M, Noble WS, Harvey E, Nunn TA, Huntemann M, Clum A, Foster B, Foster B, Roux S, Palaniappan K, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen IA, Ivanova NN, Kyrpides NC, Glavina Del Rio T, Eloe-Fadrosh EA. Nunn BL, et al. bioRxiv [Preprint]. 2024 Sep 28:2024.09.27.614549. doi: 10.1101/2024.09.27.614549. bioRxiv. 2024. Update in: Sci Data. 2024 Nov 22;11(1):1270. doi: 10.1038/s41597-024-04013-5 PMID: 39386737 Free PMC article. Updated. Preprint.
330 results