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A rice variation map derived from 10 548 rice accessions reveals the importance of rare variants.
Wang T, He W, Li X, Zhang C, He H, Yuan Q, Zhang B, Zhang H, Leng Y, Wei H, Xu Q, Shi C, Liu X, Guo M, Wang X, Chen W, Zhang Z, Yang L, Lv Y, Qian H, Zhang B, Yu X, Liu C, Cao X, Cui Y, Zhang Q, Dai X, Guo L, Wang Y, Zhou Y, Ruan J, Qian Q, Shang L. Wang T, et al. Among authors: wang x, wang y. Nucleic Acids Res. 2023 Nov 10;51(20):10924-10933. doi: 10.1093/nar/gkad840. Nucleic Acids Res. 2023. PMID: 37843097 Free PMC article.
A complete assembly of the rice Nipponbare reference genome.
Shang L, He W, Wang T, Yang Y, Xu Q, Zhao X, Yang L, Zhang H, Li X, Lv Y, Chen W, Cao S, Wang X, Zhang B, Liu X, Yu X, He H, Wei H, Leng Y, Shi C, Guo M, Zhang Z, Zhang B, Yuan Q, Qian H, Cao X, Cui Y, Zhang Q, Dai X, Liu C, Guo L, Zhou Y, Zheng X, Ruan J, Cheng Z, Pan W, Qian Q. Shang L, et al. Among authors: wang x, wang t. Mol Plant. 2023 Aug 7;16(8):1232-1236. doi: 10.1016/j.molp.2023.08.003. Epub 2023 Aug 7. Mol Plant. 2023. PMID: 37553831 Free article. No abstract available.
A centromere map based on super pan-genome highlights the structure and function of rice centromeres.
Lv Y, Liu C, Li X, Wang Y, He H, He W, Chen W, Yang L, Dai X, Cao X, Yu X, Liu J, Zhang B, Wei H, Zhang H, Qian H, Shi C, Leng Y, Liu X, Guo M, Wang X, Zhang Z, Wang T, Zhang B, Xu Q, Cui Y, Zhang Q, Yuan Q, Jahan N, Ma J, Zheng X, Zhou Y, Qian Q, Guo L, Shang L. Lv Y, et al. Among authors: wang x, wang y, wang t. J Integr Plant Biol. 2024 Feb;66(2):196-207. doi: 10.1111/jipb.13607. Epub 2024 Jan 29. J Integr Plant Biol. 2024. PMID: 38158885
Widespread inversions shape the genetic and phenotypic diversity in rice.
He W, He H, Yuan Q, Zhang H, Li X, Wang T, Yang Y, Yang L, Yang Y, Liu X, Wei H, Zhang H, Zhang B, Guo M, Leng Y, Shi C, Lv Y, Chen W, Wang X, Zhang Z, Yu B, Zhang B, Xu Q, Qian H, Zhou Y, Wang S, Qian Q, Shang L. He W, et al. Among authors: wang x, wang t, wang s. Sci Bull (Beijing). 2024 Mar 15;69(5):593-596. doi: 10.1016/j.scib.2023.12.048. Epub 2023 Dec 29. Sci Bull (Beijing). 2024. PMID: 38233278 Free article. No abstract available.
Uncovering key salt-tolerant regulators through a combined eQTL and GWAS analysis using the super pan-genome in rice.
Wei H, Wang X, Zhang Z, Yang L, Zhang Q, Li Y, He H, Chen D, Zhang B, Zheng C, Leng Y, Cao X, Cui Y, Shi C, Liu Y, Lv Y, Ma J, He W, Liu X, Xu Q, Yuan Q, Yu X, Wang T, Qian H, Li X, Zhang B, Zhang H, Chen W, Guo M, Dai X, Wang Y, Zheng X, Guo L, Xie X, Qian Q, Shang L. Wei H, et al. Among authors: wang x, wang y, wang t. Natl Sci Rev. 2024 Feb 5;11(4):nwae043. doi: 10.1093/nsr/nwae043. eCollection 2024 Apr. Natl Sci Rev. 2024. PMID: 38650829 Free PMC article.
Population-level exploration of alternative splicing and its unique role in controlling agronomic traits of rice.
Zhang H, Chen W, Zhu D, Zhang B, Xu Q, Shi C, He H, Dai X, Li Y, He W, Lv Y, Yang L, Cao X, Cui Y, Leng Y, Wei H, Liu X, Zhang B, Wang X, Guo M, Zhang Z, Li X, Liu C, Yuan Q, Wang T, Yu X, Qian H, Zhang Q, Chen D, Hu G, Qian Q, Shang L. Zhang H, et al. Among authors: wang x, wang t. Plant Cell. 2024 Oct 3;36(10):4372-4387. doi: 10.1093/plcell/koae181. Plant Cell. 2024. PMID: 38916914
A pan-TE map highlights transposable elements underlying domestication and agronomic traits in Asian rice.
Li X, Dai X, He H, Lv Y, Yang L, He W, Liu C, Wei H, Liu X, Yuan Q, Wang X, Wang T, Zhang B, Zhang H, Chen W, Leng Y, Yu X, Qian H, Zhang B, Guo M, Zhang Z, Shi C, Zhang Q, Cui Y, Xu Q, Cao X, Chen D, Zhou Y, Qian Q, Shang L. Li X, et al. Among authors: wang x, wang t. Natl Sci Rev. 2024 Jun 4;11(6):nwae188. doi: 10.1093/nsr/nwae188. eCollection 2024 Jun. Natl Sci Rev. 2024. PMID: 38962716 Free PMC article.
The pan-tandem repeat map highlights multiallelic variants underlying gene expression and agronomic traits in rice.
He H, Leng Y, Cao X, Zhu Y, Li X, Yuan Q, Zhang B, He W, Wei H, Liu X, Xu Q, Guo M, Zhang H, Yang L, Lv Y, Wang X, Shi C, Zhang Z, Chen W, Zhang B, Wang T, Yu X, Qian H, Zhang Q, Dai X, Liu C, Cui Y, Wang Y, Zheng X, Xiong G, Zhou Y, Qian Q, Shang L. He H, et al. Among authors: wang x, wang y, wang t. Nat Commun. 2024 Aug 24;15(1):7291. doi: 10.1038/s41467-024-51854-0. Nat Commun. 2024. PMID: 39181885 Free PMC article.
RBB1 negatively regulates rice disease resistance by modulating protein glycosylation.
Zhang B, Guo M, Liu X, Zhang B, Cui Y, Cao X, Zhang Z, Shi C, Wei H, He H, Zhang H, Zhu Y, Wang X, Lv Y, Yu X, Chen D, Yuan Q, Teng S, Sun T, Qian Q, Shang L. Zhang B, et al. Among authors: wang x. J Integr Plant Biol. 2024 Dec 2. doi: 10.1111/jipb.13810. Online ahead of print. J Integr Plant Biol. 2024. PMID: 39620422
209,129 results
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