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A meta-analysis of rice phosphoproteomics data to understand variation in cell signalling across the rice pan-genome.
Ramsbottom KA, Prakash A, Riverol YP, Camacho OM, Sun Z, Kundu DJ, Bowler-Barnett E, Martin M, Fan J, Chebotarov D, McNally KL, Deutsch EW, Vizcaíno JA, Jones AR. Ramsbottom KA, et al. Among authors: sun z. bioRxiv [Preprint]. 2023 Nov 17:2023.11.17.567512. doi: 10.1101/2023.11.17.567512. bioRxiv. 2023. Update in: J Proteome Res. 2024 Jul 5;23(7):2518-2531. doi: 10.1021/acs.jproteome.4c00187 PMID: 38014076 Free PMC article. Updated. Preprint.
PASSEL: the PeptideAtlas SRMexperiment library.
Farrah T, Deutsch EW, Kreisberg R, Sun Z, Campbell DS, Mendoza L, Kusebauch U, Brusniak MY, Hüttenhain R, Schiess R, Selevsek N, Aebersold R, Moritz RL. Farrah T, et al. Among authors: sun z. Proteomics. 2012 Apr;12(8):1170-5. doi: 10.1002/pmic.201100515. Proteomics. 2012. PMID: 22318887 Free PMC article.
A Bovine PeptideAtlas of milk and mammary gland proteomes.
Bislev SL, Deutsch EW, Sun Z, Farrah T, Aebersold R, Moritz RL, Bendixen E, Codrea MC. Bislev SL, et al. Among authors: sun z. Proteomics. 2012 Sep;12(18):2895-9. doi: 10.1002/pmic.201200057. Proteomics. 2012. PMID: 22837157 Free PMC article.
The state of the human proteome in 2012 as viewed through PeptideAtlas.
Farrah T, Deutsch EW, Hoopmann MR, Hallows JL, Sun Z, Huang CY, Moritz RL. Farrah T, et al. Among authors: sun z. J Proteome Res. 2013 Jan 4;12(1):162-71. doi: 10.1021/pr301012j. Epub 2012 Dec 5. J Proteome Res. 2013. PMID: 23215161 Free PMC article.
ProteomeXchange provides globally coordinated proteomics data submission and dissemination.
Vizcaíno JA, Deutsch EW, Wang R, Csordas A, Reisinger F, Ríos D, Dianes JA, Sun Z, Farrah T, Bandeira N, Binz PA, Xenarios I, Eisenacher M, Mayer G, Gatto L, Campos A, Chalkley RJ, Kraus HJ, Albar JP, Martinez-Bartolomé S, Apweiler R, Omenn GS, Martens L, Jones AR, Hermjakob H. Vizcaíno JA, et al. Among authors: sun z. Nat Biotechnol. 2014 Mar;32(3):223-6. doi: 10.1038/nbt.2839. Nat Biotechnol. 2014. PMID: 24727771 Free PMC article. No abstract available.
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