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Page 1
De novo design of diverse small molecule binders and sensors using Shape Complementary Pseudocycles.
An L, Said M, Tran L, Majumder S, Goreshnik I, Lee GR, Juergens D, Dauparas J, Anishchenko I, Coventry B, Bera AK, Kang A, Levine PM, Alvarez V, Pillai A, Norn C, Feldman D, Zorine D, Hicks DR, Li X, Sanchez MG, Vafeados DK, Salveson PJ, Vorobieva AA, Baker D. An L, et al. bioRxiv [Preprint]. 2023 Dec 21:2023.12.20.572602. doi: 10.1101/2023.12.20.572602. bioRxiv. 2023. Update in: Science. 2024 Jul 19;385(6706):276-282. doi: 10.1126/science.adn3780 PMID: 38187589 Free PMC article. Updated. Preprint.
Hallucination of closed repeat proteins containing central pockets.
An L, Hicks DR, Zorine D, Dauparas J, Wicky BIM, Milles LF, Courbet A, Bera AK, Nguyen H, Kang A, Carter L, Baker D. An L, et al. Nat Struct Mol Biol. 2023 Nov;30(11):1755-1760. doi: 10.1038/s41594-023-01112-6. Epub 2023 Sep 28. Nat Struct Mol Biol. 2023. PMID: 37770718 Free PMC article.
Binding and sensing diverse small molecules using shape-complementary pseudocycles.
An L, Said M, Tran L, Majumder S, Goreshnik I, Lee GR, Juergens D, Dauparas J, Anishchenko I, Coventry B, Bera AK, Kang A, Levine PM, Alvarez V, Pillai A, Norn C, Feldman D, Zorine D, Hicks DR, Li X, Sanchez MG, Vafeados DK, Salveson PJ, Vorobieva AA, Baker D. An L, et al. Science. 2024 Jul 19;385(6706):276-282. doi: 10.1126/science.adn3780. Epub 2024 Jul 18. Science. 2024. PMID: 39024436 Free PMC article.
Modeling protein-small molecule conformational ensembles with ChemNet.
Anishchenko I, Kipnis Y, Kalvet I, Zhou G, Krishna R, Pellock SJ, Lauko A, Lee GR, An L, Dauparas J, DiMaio F, Baker D. Anishchenko I, et al. Among authors: an l. bioRxiv [Preprint]. 2024 Sep 25:2024.09.25.614868. doi: 10.1101/2024.09.25.614868. bioRxiv. 2024. PMID: 39386615 Free PMC article. Preprint.
The International Bathymetric Chart of the Arctic Ocean Version 5.0.
Jakobsson M, Mohammad R, Karlsson M, Salas-Romero S, Vacek F, Heinze F, Bringensparr C, Castro CF, Johnson P, Kinney J, Cardigos S, Bogonko M, Accettella D, Amblas D, An L, Bohan A, Brandt A, Bünz S, Canals M, Casamor JL, Coakley B, Cornish N, Danielson S, Demarte M, Di Franco D, Dickson ML, Dorschel B, Dowdeswell JA, Dreutter S, Fremand AC, Hall JK, Hally B, Holland D, Hong JK, Ivaldi R, Knutz PC, Krawczyk DW, Kristofferson Y, Lastras G, Leck C, Lucchi RG, Masetti G, Morlighem M, Muchowski J, Nielsen T, Noormets R, Plaza-Faverola A, Prescott MM, Purser A, Rasmussen TL, Rebesco M, Rignot E, Rysgaard S, Silyakova A, Snoeijs-Leijonmalm P, Sørensen A, Straneo F, Sutherland DA, Tate AJ, Travaglini P, Trenholm N, van Wijk E, Wallace L, Willis JK, Wood M, Zimmermann M, Zinglersen KB, Mayer L. Jakobsson M, et al. Among authors: an l. Sci Data. 2024 Dec 21;11(1):1420. doi: 10.1038/s41597-024-04278-w. Sci Data. 2024. PMID: 39709502 Free PMC article.
3,284 results