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Functional identification of cis-regulatory long noncoding RNAs at controlled false discovery rates.
Dhaka B, Zimmerli M, Hanhart D, Moser MB, Guillen-Ramirez H, Mishra S, Esposito R, Polidori T, Widmer M, García-Pérez R, Julio MK, Pervouchine D, Melé M, Chouvardas P, Johnson R. Dhaka B, et al. Among authors: pervouchine d. Nucleic Acids Res. 2024 Apr 12;52(6):2821-2835. doi: 10.1093/nar/gkae075. Nucleic Acids Res. 2024. PMID: 38348970 Free PMC article.
Tissue-specific regulation of gene expression via unproductive splicing.
Mironov A, Petrova M, Margasyuk S, Vlasenok M, Mironov AA, Skvortsov D, Pervouchine DD. Mironov A, et al. Among authors: pervouchine dd. Nucleic Acids Res. 2023 Apr 24;51(7):3055-3066. doi: 10.1093/nar/gkad161. Nucleic Acids Res. 2023. PMID: 36912101 Free PMC article.
Human genomics. The human transcriptome across tissues and individuals.
Melé M, Ferreira PG, Reverter F, DeLuca DS, Monlong J, Sammeth M, Young TR, Goldmann JM, Pervouchine DD, Sullivan TJ, Johnson R, Segrè AV, Djebali S, Niarchou A; GTEx Consortium; Wright FA, Lappalainen T, Calvo M, Getz G, Dermitzakis ET, Ardlie KG, Guigó R. Melé M, et al. Among authors: pervouchine dd. Science. 2015 May 8;348(6235):660-5. doi: 10.1126/science.aaa0355. Science. 2015. PMID: 25954002 Free PMC article.
Expanded encyclopaedias of DNA elements in the human and mouse genomes.
ENCODE Project Consortium; Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, Shen Y, He Y, Mackiewicz M, Pauli-Behn F, Williams BA, Mortazavi A, Keller CA, Zhang XO, Elhajjajy SI, Huey J, Dickel DE, Snetkova V, Wei X, Wang X, Rivera-Mulia JC, Rozowsky J, Zhang J, Chhetri SB, Zhang J, Victorsen A, White KP, Visel A, Yeo GW, Burge CB, Lécuyer E, Gilbert DM, Dekker J, Rinn J, Mendenhall EM, Ecker JR, Kellis M, Klein RJ, Noble WS, Kundaje A, Guigó R, Farnham PJ, Cherry JM, Myers RM, Ren B, Graveley BR, Gerstein MB, Pennacchio LA, Snyder MP, Bernstein BE, Wold B, Hardison RC, Gingeras TR, Stamatoyannopoulos JA, Weng Z. ENCODE Project Consortium, et al. Nature. 2020 Jul;583(7818):699-710. doi: 10.1038/s41586-020-2493-4. Epub 2020 Jul 29. Nature. 2020. PMID: 32728249 Free PMC article.
51 results