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Page 1
Ventilatory capacity in CLAD is driven by dysfunctional airway structure.
Kerckhof P, Ambrocio GPL, Beeckmans H, Kaes J, Geudens V, Bos S, Willems L, Vermaut A, Vermant M, Goos T, De Fays C, Aversa L, Mohamady Y, Vanstapel A, Orlitová M, Van Slambrouck J, Jin X, Varghese V, Josipovic I, Boone MN, Dupont LJ, Weynand B, Dubbeldam A, Van Raemdonck DE, Ceulemans LJ, Gayan-Ramirez G, De Sadeleer LJ, McDonough JE, Vanaudenaerde BM, Vos R. Kerckhof P, et al. Among authors: mcdonough je. EBioMedicine. 2024 Mar;101:105030. doi: 10.1016/j.ebiom.2024.105030. Epub 2024 Feb 22. EBioMedicine. 2024. PMID: 38394744 Free PMC article.
A Multi-omic Analysis of the Human Lung Reveals Distinct Cell Specific Aging and Senescence Molecular Programs.
De Man R, McDonough JE, Adams TS, Manning EP, Myers G, Vos R, Ceulemans L, Dupont L, Vanaudenaerde BM, Wuyts WA, Rosas IO, Hagood JS, Ambalavanan N, Niklason L, Hansen KC, Yan X, Kaminski N. De Man R, et al. Among authors: mcdonough je. bioRxiv [Preprint]. 2023 Apr 19:2023.04.19.536722. doi: 10.1101/2023.04.19.536722. bioRxiv. 2023. PMID: 37131739 Free PMC article. Preprint.
COVID-19 progression in hospitalized patients using follow-up in vivo CT and ex vivo microCT.
Geudens V, Van Slambrouck J, Aerts G, Willems L, Goos T, Kaes J, Zajacova A, Gyselinck I, Aelbrecht C, Vermaut A, Beeckmans H, Vermant M, De Fays C, Sacreas A, Aversa L, Orlitova M, Vanstapel A, Josipovic I, Boone MN, McDonough JE, Weynand B, Pilette C, Janssens W, Dupont L, Wuyts WA, Verleden GM, Van Raemdonck DE, Vos R, Gayan-Ramirez G, Ceulemans LJ, Vanaudenaerde BM. Geudens V, et al. Among authors: mcdonough je. J Thorac Dis. 2023 Jul 31;15(7):3646-3661. doi: 10.21037/jtd-22-1488. Epub 2023 Jul 3. J Thorac Dis. 2023. PMID: 37559650 Free PMC article.
Mucosal immune alterations at the early onset of tissue destruction in chronic obstructive pulmonary disease.
de Fays C, Geudens V, Gyselinck I, Kerckhof P, Vermaut A, Goos T, Vermant M, Beeckmans H, Kaes J, Van Slambrouck J, Mohamady Y, Willems L, Aversa L, Cortesi EE, Hooft C, Aerts G, Aelbrecht C, Everaerts S, McDonough JE, De Sadeleer LJ, Gohy S, Ambroise J, Janssens W, Ceulemans LJ, Van Raemdonck D, Vos R, Hackett TL, Hogg JC, Kaminski N, Gayan-Ramirez G, Pilette C, Vanaudenaerde BM. de Fays C, et al. Among authors: mcdonough je. Front Immunol. 2023 Oct 17;14:1275845. doi: 10.3389/fimmu.2023.1275845. eCollection 2023. Front Immunol. 2023. PMID: 37915582 Free PMC article.
Unagi: Deep Generative Model for Deciphering Cellular Dynamics and In-Silico Drug Discovery in Complex Diseases.
Zheng Y, Schupp JC, Adams T, Clair G, Justet A, Ahangari F, Yan X, Hansen P, Carlon M, Cortesi E, Vermant M, Vos R, De Sadeleer LJ, Rosas IO, Pineda R, Sembrat J, Königshoff M, McDonough JE, Vanaudenaerde BM, Wuyts WA, Kaminski N, Ding J. Zheng Y, et al. Among authors: mcdonough je. Res Sq [Preprint]. 2023 Dec 18:rs.3.rs-3676579. doi: 10.21203/rs.3.rs-3676579/v1. Res Sq. 2023. PMID: 38196613 Free PMC article. Preprint.
The nature of chronic rejection after lung transplantation: a murine orthotopic lung transplant study.
Heigl T, Kaes J, Aelbrecht C, Serré J, Yamada Y, Geudens V, Van Herck A, Vanstapel A, Sacreas A, Ordies S, Frick A, Saez Gimenez B, Van Slambrouck J, Beeckmans H, Acet Oztürk NA, Orlitova M, Vaneylen A, Claes S, Schols D, Vande Velde G, Schupp J, Kaminski N, Boesch M, Korf H, van der Merwe S, Dupont L, Vanoirbeek J, Godinas L, Van Raemdonck DE, Janssens W, Gayan-Ramirez G, Ceulemans LJ, McDonough JE, Verbeken EK, Vos R, Vanaudenaerde BM. Heigl T, et al. Among authors: mcdonough je. Front Immunol. 2024 Apr 25;15:1369536. doi: 10.3389/fimmu.2024.1369536. eCollection 2024. Front Immunol. 2024. PMID: 38736881 Free PMC article.
Airway Remodeling in Cystic Fibrosis Is Heterogeneous.
Vermaut A, Geudens V, Willems L, Aerts G, Kerckhof P, Hooft C, Beeckmans H, Kaes J, Jin X, De Fays C, Mohamady Y, Van Slambrouck J, Aversa L, Verhaegen J, Cortesi EE, Weynand B, Boone MN, McDonough JE, Van Raemdonck DE, Ceulemans LJ, Wuyts WA, Vos R, Gayan-Ramirez G, Vermeulen F, Proesmans M, Vanaudenaerde BM, Dupont LJ, Boon M. Vermaut A, et al. Among authors: mcdonough je. Ann Am Thorac Soc. 2024 Dec 19. doi: 10.1513/AnnalsATS.202404-446OC. Online ahead of print. Ann Am Thorac Soc. 2024. PMID: 39700513
Predicting lung aging using scRNA-Seq data.
Song Q, Singh A, McDonough JE, Adams TS, Vos R, De Man R, Myers G, Ceulemans LJ, Vanaudenaerde BM, Wuyts WA, Yan X, Schuppe J, Hagood JS, Kaminski N, Bar-Joseph Z. Song Q, et al. Among authors: mcdonough je. PLoS Comput Biol. 2024 Dec 19;20(12):e1012632. doi: 10.1371/journal.pcbi.1012632. Online ahead of print. PLoS Comput Biol. 2024. PMID: 39700255 Free article.
Stem cell migration drives lung repair in living mice.
Chioccioli M, Liu S, Magruder S, Tata A, Borriello L, McDonough JE, Konkimalla A, Kim SH, Nouws J, Gonzalez DG, Traub B, Ye X, Yang T, Entenberg DR, Krishnaswamy S, Hendry CE, Kaminski N, Tata PR, Sauler M. Chioccioli M, et al. Among authors: mcdonough je. Dev Cell. 2024 Apr 8;59(7):830-840.e4. doi: 10.1016/j.devcel.2024.02.003. Epub 2024 Feb 19. Dev Cell. 2024. PMID: 38377991 Free article.
The IBEX Imaging Knowledge-Base: A Community Resource Enabling Adoption and Development of Immunofluoresence Imaging Methods.
Yaniv Z, Anidi IU, Arakkal L, Arroyo-Mejías AJ, Beuschel RT, Börner K, Chu CJ, Clark B, Clatworthy MR, Colautti J, Coscia F, Croteau J, Denha S, Dever R, Dutra WO, Fritzsche S, Fullam S, Gerner MY, Gola A, Gollob KJ, Hernandez JM, Hor JL, Ichise H, Jing Z, Jonigk D, Kandov E, Kastenmüller W, Koenig JFE, Kothurkar A, Kortekaas RK, Kreins AY, Lamborn IT, Lin Y, Morais KLP, Lunich A, Luz JCS, MacDonald RB, Makranz C, Maltez VI, McDonough JE, Moriarty RV, Ocampo-Godinez JM, Olyntho VM, Oxenius A, Padhan K, Remmert K, Richoz N, Schrom EC, Shang W, Shi L, Shih RM, Speranza E, Stierli S, Teichmann SA, Veres TZ, Vierhout M, Wachter BT, Williams M, Zangger N, Germain RN, Radtke AJ. Yaniv Z, et al. Among authors: mcdonough je. ArXiv [Preprint]. 2024 Dec 17:arXiv:2412.12965v1. ArXiv. 2024. PMID: 39764400 Free PMC article. Preprint.
130 results