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Novel spore-forming species exhibiting intrinsic resistance to third- and fourth-generation cephalosporins and description of Tigheibacillus jepli gen. nov., sp. nov.
Miliotis G, Sengupta P, Hameed A, Chuvochina M, McDonagh F, Simpson AC, Parker CW, Singh NK, Rekha PD, Morris D, Raman K, Kyrpides NC, Hugenholtz P, Venkateswaran K. Miliotis G, et al. Among authors: hugenholtz p. mBio. 2024 Apr 10;15(4):e0018124. doi: 10.1128/mbio.00181-24. Epub 2024 Mar 13. mBio. 2024. PMID: 38477597 Free PMC article.
The integrated microbial genomes (IMG) system.
Markowitz VM, Korzeniewski F, Palaniappan K, Szeto E, Werner G, Padki A, Zhao X, Dubchak I, Hugenholtz P, Anderson I, Lykidis A, Mavromatis K, Ivanova N, Kyrpides NC. Markowitz VM, et al. Among authors: hugenholtz p. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D344-8. doi: 10.1093/nar/gkj024. Nucleic Acids Res. 2006. PMID: 16381883 Free PMC article.
A call for standardized classification of metagenome projects.
Ivanova N, Tringe SG, Liolios K, Liu WT, Morrison N, Hugenholtz P, Kyrpides NC. Ivanova N, et al. Among authors: hugenholtz p. Environ Microbiol. 2010 Jul;12(7):1803-5. doi: 10.1111/j.1462-2920.2010.02270.x. Environ Microbiol. 2010. PMID: 20653767 Free article. Review. No abstract available.
Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8(T)).
Anderson I, Munk C, Lapidus A, Nolan M, Lucas S, Tice H, Del Rio TG, Cheng JF, Han C, Tapia R, Goodwin L, Pitluck S, Liolios K, Mavromatis K, Pagani I, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Rohde M, Tindall BJ, Göker M, Detter JC, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Ivanova N. Anderson I, et al. Among authors: hugenholtz p. Stand Genomic Sci. 2012 Dec 19;7(2):210-20. doi: 10.4056/sigs.3117229. Epub 2012 Dec 4. Stand Genomic Sci. 2012. PMID: 23408178 Free PMC article.
Complete genome sequence of the bile-resistant pigment-producing anaerobe Alistipes finegoldii type strain (AHN2437(T)).
Mavromatis K, Stackebrandt E, Munk C, Lapidus A, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng JF, Tapia R, Goodwin LA, Pitluck S, Liolios K, Pagani I, Ivanova N, Mikhailova N, Huntemann M, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Rohde M, Gronow S, Göker M, Detter JC, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Woyke T. Mavromatis K, et al. Among authors: hugenholtz p. Stand Genomic Sci. 2013 Apr 15;8(1):26-36. doi: 10.4056/sigs.3527032. eCollection 2013 Apr 15. Stand Genomic Sci. 2013. PMID: 23961309 Free PMC article.
Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055(T)).
Huntemann M, Stackebrandt E, Held B, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng JF, Tapia R, Goodwin LA, Pitluck S, Liolios K, Pagani I, Ivanova N, Mavromatis K, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Rohde M, Gronow S, Göker M, Detter JC, Bristow J, Eisen JA, Markowitz V, Woyke T, Hugenholtz P, Kyrpides NC, Klenk HP, Lapidus A. Huntemann M, et al. Among authors: hugenholtz p. Stand Genomic Sci. 2013 May 25;8(2):177-87. doi: 10.4056/sigs.3637201. eCollection 2013. Stand Genomic Sci. 2013. PMID: 23991250 Free PMC article.
Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701(T)) and emended description of the genus Thermanaerovibrio.
Palaniappan K, Meier-Kolthoff JP, Teshima H, Nolan M, Lapidus A, Tice H, Del Rio TG, Cheng JF, Han C, Tapia R, Goodwin LA, Pitluck S, Liolios K, Mavromatis K, Pagani I, Ivanova N, Mikhailova N, Pati A, Chen A, Rohde M, Mayilraj S, Spring S, Detter JC, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Woyke T. Palaniappan K, et al. Among authors: hugenholtz p. Stand Genomic Sci. 2013 Oct 2;9(1):57-70. doi: 10.4056/sigs.4237901. eCollection 2013 Oct 16. Stand Genomic Sci. 2013. PMID: 24501645 Free PMC article.
762 results