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Page 1
Making PBPK models more reproducible in practice.
Domínguez-Romero E, Mazurenko S, Scheringer M, Martins Dos Santos VAP, Evelo CT, Anton M, Hancock JM, Županič A, Suarez-Diez M. Domínguez-Romero E, et al. Among authors: suarez diez m. Brief Bioinform. 2024 Sep 23;25(6):bbae569. doi: 10.1093/bib/bbae569. Brief Bioinform. 2024. PMID: 39494970 Free PMC article.
CFSA: Comparative flux sampling analysis as a guide for strain design.
van Rosmalen RP, Moreno-Paz S, Duman-Özdamar ZE, Suarez-Diez M. van Rosmalen RP, et al. Among authors: suarez diez m. Metab Eng Commun. 2024 Jun 24;19:e00244. doi: 10.1016/j.mec.2024.e00244. eCollection 2024 Dec. Metab Eng Commun. 2024. PMID: 39072282 Free PMC article.
Machine Learning-Guided Optimization of p-Coumaric Acid Production in Yeast.
Moreno-Paz S, van der Hoek R, Eliana E, Zwartjens P, Gosiewska S, Martins Dos Santos VAP, Schmitz J, Suarez-Diez M. Moreno-Paz S, et al. Among authors: suarez diez m. ACS Synth Biol. 2024 Apr 19;13(4):1312-1322. doi: 10.1021/acssynbio.4c00035. Epub 2024 Mar 28. ACS Synth Biol. 2024. PMID: 38545878 Free PMC article.
A bacterial sulfoglycosidase highlights mucin O-glycan breakdown in the gut ecosystem.
Katoh T, Yamada C, Wallace MD, Yoshida A, Gotoh A, Arai M, Maeshibu T, Kashima T, Hagenbeek A, Ojima MN, Takada H, Sakanaka M, Shimizu H, Nishiyama K, Ashida H, Hirose J, Suarez-Diez M, Nishiyama M, Kimura I, Stubbs KA, Fushinobu S, Katayama T. Katoh T, et al. Among authors: suarez diez m. Nat Chem Biol. 2023 Jun;19(6):778-789. doi: 10.1038/s41589-023-01272-y. Epub 2023 Mar 2. Nat Chem Biol. 2023. PMID: 36864192 Free article.
Systems Biology in ELIXIR: modelling in the spotlight.
Martins Dos Santos V, Anton M, Szomolay B, Ostaszewski M, Arts I, Benfeitas R, Dominguez Del Angel V, Domínguez-Romero E, Ferk P, Fey D, Goble C, Golebiewski M, Gruden K, Heil KF, Hermjakob H, Kahlem P, Klapa MI, Koehorst J, Kolodkin A, Kutmon M, Leskošek B, Moretti S, Müller W, Pagni M, Rezen T, Rocha M, Rozman D, Šafránek D, T Scott W, Sheriff RSM, Suarez Diez M, Van Steen K, Westerhoff HV, Wittig U, Wolstencroft K, Zupanic A, Evelo CT, Hancock JM. Martins Dos Santos V, et al. Among authors: suarez diez m. F1000Res. 2022 Nov 7;11:ELIXIR-1265. doi: 10.12688/f1000research.126734.2. eCollection 2022. F1000Res. 2022. PMID: 36742342 Free PMC article.
Model-driven approach for the production of butyrate from CO2/H2 by a novel co-culture of C. autoethanogenum and C. beijerinckii.
Benito-Vaquerizo S, Nouse N, Schaap PJ, Hugenholtz J, Brul S, López-Contreras AM, Martins Dos Santos VAP, Suarez-Diez M. Benito-Vaquerizo S, et al. Among authors: suarez diez m. Front Microbiol. 2022 Dec 22;13:1064013. doi: 10.3389/fmicb.2022.1064013. eCollection 2022. Front Microbiol. 2022. PMID: 36620068 Free PMC article.
78 results