Narykov O - Search Results

1

Singhal A, Zhao X, Wall P, So E, Calderini G, Partin A, Koussa N, Vasanthakumari P, Narykov O, Zhu Y, Jones SE, Abbas-Aghababazadeh F, Kadambat Nair S, Bélisle-Pipon JC, Jayaram A, Parker BA, Yeung KT, Griffiths JI, Weil R, Nath A, Haibe-Kains B, Ideker T. Singhal A, et al. Among authors: narykov o. Cancer Discov. 2025 Jan 6:OF1-OF15. doi: 10.1158/2159-8290.CD-24-0760. Online ahead of print. Cancer Discov. 2025. PMID: 39760657

2

Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain.

Joglekar A, Hu W, Zhang B, Narykov O, Diekhans M, Marrocco J, Balacco J, Ndhlovu LC, Milner TA, Fedrigo O, Jarvis ED, Sheynkman G, Korkin D, Ross ME, Tilgner HU. Joglekar A, et al. Among authors: narykov o. Nat Neurosci. 2024 Jun;27(6):1051-1063. doi: 10.1038/s41593-024-01616-4. Epub 2024 Apr 9. Nat Neurosci. 2024. PMID: 38594596 Free PMC article.

3

A Comprehensive Investigation of Active Learning Strategies for Conducting Anti-Cancer Drug Screening.

Vasanthakumari P, Zhu Y, Brettin T, Partin A, Shukla M, Xia F, Narykov O, Weil MR, Stevens RL. Vasanthakumari P, et al. Among authors: narykov o. Cancers (Basel). 2024 Jan 26;16(3):530. doi: 10.3390/cancers16030530. Cancers (Basel). 2024. PMID: 38339281 Free PMC article.

4

Integration of Computational Docking into Anti-Cancer Drug Response Prediction Models.

Narykov O, Zhu Y, Brettin T, Evrard YA, Partin A, Shukla M, Xia F, Clyde A, Vasanthakumari P, Doroshow JH, Stevens RL. Narykov O, et al. Cancers (Basel). 2023 Dec 21;16(1):50. doi: 10.3390/cancers16010050. Cancers (Basel). 2023. PMID: 38201477 Free PMC article.

5

Single-cell long-read mRNA isoform regulation is pervasive across mammalian brain regions, cell types, and development.

Joglekar A, Hu W, Zhang B, Narykov O, Diekhans M, Balacco J, Ndhlovu LC, Milner TA, Fedrigo O, Jarvis ED, Sheynkman G, Korkin D, Ross ME, Tilgner HU. Joglekar A, et al. Among authors: narykov o. bioRxiv [Preprint]. 2023 Apr 4:2023.04.02.535281. doi: 10.1101/2023.04.02.535281. bioRxiv. 2023. PMID: 37066387 Free PMC article. Preprint.

6

Deep learning methods for drug response prediction in cancer: Predominant and emerging trends.

Partin A, Brettin TS, Zhu Y, Narykov O, Clyde A, Overbeek J, Stevens RL. Partin A, et al. Among authors: narykov o. Front Med (Lausanne). 2023 Feb 15;10:1086097. doi: 10.3389/fmed.2023.1086097. eCollection 2023. Front Med (Lausanne). 2023. PMID: 36873878 Free PMC article. Review.

7

Molecular architecture and dynamics of SARS-CoV-2 envelope by integrative modeling.

Pezeshkian W, Grünewald F, Narykov O, Lu S, Arkhipova V, Solodovnikov A, Wassenaar TA, Marrink SJ, Korkin D. Pezeshkian W, et al. Among authors: narykov o. Structure. 2023 Apr 6;31(4):492-503.e7. doi: 10.1016/j.str.2023.02.006. Epub 2023 Mar 3. Structure. 2023. PMID: 36870335 Free article.

8

Predicting protein interaction network perturbation by alternative splicing with semi-supervised learning.

Narykov O, Johnson NT, Korkin D. Narykov O, et al. Cell Rep. 2021 Nov 23;37(8):110045. doi: 10.1016/j.celrep.2021.110045. Cell Rep. 2021. PMID: 34818539 Free article.

9

Computational protein modeling and the next viral pandemic.

Narykov O, Srinivasan S, Korkin D. Narykov O, et al. Nat Methods. 2021 May;18(5):444-445. doi: 10.1038/s41592-021-01144-0. Nat Methods. 2021. PMID: 33963340 Free PMC article. No abstract available.

10

Structural Genomics of SARS-CoV-2 Indicates Evolutionary Conserved Functional Regions of Viral Proteins.

Srinivasan S, Cui H, Gao Z, Liu M, Lu S, Mkandawire W, Narykov O, Sun M, Korkin D. Srinivasan S, et al. Among authors: narykov o. Viruses. 2020 Mar 25;12(4):360. doi: 10.3390/v12040360. Viruses. 2020. PMID: 32218151 Free PMC article.

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