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An open source knowledge graph ecosystem for the life sciences.
Callahan TJ, Tripodi IJ, Stefanski AL, Cappelletti L, Taneja SB, Wyrwa JM, Casiraghi E, Matentzoglu NA, Reese J, Silverstein JC, Hoyt CT, Boyce RD, Malec SA, Unni DR, Joachimiak MP, Robinson PN, Mungall CJ, Cavalleri E, Fontana T, Valentini G, Mesiti M, Gillenwater LA, Santangelo B, Vasilevsky NA, Hoehndorf R, Bennett TD, Ryan PB, Hripcsak G, Kahn MG, Bada M, Baumgartner WA Jr, Hunter LE. Callahan TJ, et al. Sci Data. 2024 Apr 11;11(1):363. doi: 10.1038/s41597-024-03171-w. Sci Data. 2024. PMID: 38605048 Free PMC article.
Three Dimensions of Reproducibility in Natural Language Processing.
Cohen KB, Xia J, Zweigenbaum P, Callahan TJ, Hargraves O, Goss F, Ide N, Névéol A, Grouin C, Hunter LE. Cohen KB, et al. Among authors: callahan tj. LREC Int Conf Lang Resour Eval. 2018 May;2018:156-165. LREC Int Conf Lang Resour Eval. 2018. PMID: 29911205 Free PMC article.
Data Science for Child Health.
Bennett TD, Callahan TJ, Feinstein JA, Ghosh D, Lakhani SA, Spaeder MC, Szefler SJ, Kahn MG. Bennett TD, et al. Among authors: callahan tj. J Pediatr. 2019 May;208:12-22. doi: 10.1016/j.jpeds.2018.12.041. Epub 2019 Jan 25. J Pediatr. 2019. PMID: 30686480 Free PMC article. Review. No abstract available.
Murine trophoblast-derived and pregnancy-associated exosome-enriched extracellular vesicle microRNAs: Implications for placenta driven effects on maternal physiology.
Stefanski AL, Martinez N, Peterson LK, Callahan TJ, Treacy E, Luck M, Friend SF, Hermesch A, Maltepe E, Phang T, Dragone LL, Winn VD. Stefanski AL, et al. Among authors: callahan tj. PLoS One. 2019 Feb 7;14(2):e0210675. doi: 10.1371/journal.pone.0210675. eCollection 2019. PLoS One. 2019. PMID: 30730971 Free PMC article.
A Data Element-Function Conceptual Model for Data Quality Checks.
Rogers JR, Callahan TJ, Kang T, Bauck A, Khare R, Brown JS, Kahn MG, Weng C. Rogers JR, et al. Among authors: callahan tj. EGEMS (Wash DC). 2019 Apr 23;7(1):17. doi: 10.5334/egems.289. EGEMS (Wash DC). 2019. PMID: 31065558 Free PMC article.
Semantic integration of clinical laboratory tests from electronic health records for deep phenotyping and biomarker discovery.
Zhang XA, Yates A, Vasilevsky N, Gourdine JP, Callahan TJ, Carmody LC, Danis D, Joachimiak MP, Ravanmehr V, Pfaff ER, Champion J, Robasky K, Xu H, Fecho K, Walton NA, Zhu RL, Ramsdill J, Mungall CJ, Köhler S, Haendel MA, McDonald CJ, Vreeman DJ, Peden DB, Bennett TD, Feinstein JA, Martin B, Stefanski AL, Hunter LE, Chute CG, Robinson PN. Zhang XA, et al. Among authors: callahan tj. NPJ Digit Med. 2019;2:32. doi: 10.1038/s41746-019-0110-4. Epub 2019 May 2. NPJ Digit Med. 2019. PMID: 31119199 Free PMC article.
83 results