Lee D-Y - Search Results

1

Kinetics-based inference of environment-dependent microbial interactions and their dynamic variation.

Song H-S, Lee N-R, Kessell AK, McCullough HC, Park S-Y, Zhou K, Lee D-Y. Song H-S, et al. mSystems. 2024 May 16;9(5):e0130523. doi: 10.1128/msystems.01305-23. Epub 2024 Apr 29. mSystems. 2024. PMID: 38682902 Free PMC article.

2

Genome-scale metabolic network reconstruction and in silico flux analysis of the thermophilic bacterium Thermus thermophilus HB27.

Lee NR, Lakshmanan M, Aggarwal S, Song JW, Karimi IA, Lee DY, Park JB. Lee NR, et al. Microb Cell Fact. 2014 Apr 28;13:61. doi: 10.1186/1475-2859-13-61. Microb Cell Fact. 2014. PMID: 24774833 Free PMC article.

3

Genome-scale model-driven strain design for dicarboxylic acid production in Yarrowia lipolytica.

Mishra P, Lee NR, Lakshmanan M, Kim M, Kim BG, Lee DY. Mishra P, et al. BMC Syst Biol. 2018 Mar 19;12(Suppl 2):12. doi: 10.1186/s12918-018-0542-5. BMC Syst Biol. 2018. PMID: 29560822 Free PMC article.

4

Comprehensive Secondary Metabolite Profiling Toward Delineating the Solid and Submerged-State Fermentation of Aspergillus oryzae KCCM 12698.

Son SY, Lee S, Singh D, Lee NR, Lee DY, Lee CH. Son SY, et al. Front Microbiol. 2018 May 25;9:1076. doi: 10.3389/fmicb.2018.01076. eCollection 2018. Front Microbiol. 2018. PMID: 29887844 Free PMC article.

5

Metabolic Modeling of Microbial Community Interactions for Health, Environmental and Biotechnological Applications.

Ang KS, Lakshmanan M, Lee NR, Lee DY. Ang KS, et al. Curr Genomics. 2018 Dec;19(8):712-722. doi: 10.2174/1389202919666180911144055. Curr Genomics. 2018. PMID: 30532650 Free PMC article. Review.

6

Minimal Interspecies Interaction Adjustment (MIIA): Inference of Neighbor-Dependent Interactions in Microbial Communities.

Song HS, Lee JY, Haruta S, Nelson WC, Lee DY, Lindemann SR, Fredrickson JK, Bernstein HC. Song HS, et al. Front Microbiol. 2019 Jun 11;10:1264. doi: 10.3389/fmicb.2019.01264. eCollection 2019. Front Microbiol. 2019. PMID: 31263456 Free PMC article.

7

Prediction of Neighbor-Dependent Microbial Interactions From Limited Population Data.

Lee JY, Haruta S, Kato S, Bernstein HC, Lindemann SR, Lee DY, Fredrickson JK, Song HS. Lee JY, et al. Front Microbiol. 2020 Jan 21;10:3049. doi: 10.3389/fmicb.2019.03049. eCollection 2019. Front Microbiol. 2020. PMID: 32038529 Free PMC article.

8

Genome-Scale Metabolic Network Reconstruction and In Silico Analysis of Hexanoic acid Producing Megasphaera elsdenii.

Lee NR, Lee CH, Lee DY, Park JB. Lee NR, et al. Microorganisms. 2020 Apr 9;8(4):539. doi: 10.3390/microorganisms8040539. Microorganisms. 2020. PMID: 32283671 Free PMC article.

9

Genome scale metabolic models and analysis for evaluating probiotic potentials.

Choi YM, Lee YQ, Song HS, Lee DY. Choi YM, et al. Biochem Soc Trans. 2020 Aug 28;48(4):1309-1321. doi: 10.1042/BST20190668. Biochem Soc Trans. 2020. PMID: 32726414 Review.

10

Editorial: Predictive Modeling of Human Microbiota and Their Role in Health and Disease.

Song HS, Lindemann SR, Lee DY. Song HS, et al. Front Microbiol. 2021 Nov 30;12:782871. doi: 10.3389/fmicb.2021.782871. eCollection 2021. Front Microbiol. 2021. PMID: 34917060 Free PMC article. No abstract available.

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