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Phylogenomics and genetic analysis of solvent-producing Clostridium species.
Jensen RO, Schulz F, Roux S, Klingeman DM, Mitchell WP, Udwary D, Moraïs S, Reynoso V, Winkler J, Nagaraju S, De Tissera S, Shapiro N, Ivanova N, Reddy TBK, Mizrahi I, Utturkar SM, Bayer EA, Woyke T, Mouncey NJ, Jewett MC, Simpson SD, Köpke M, Jones DT, Brown SD. Jensen RO, et al. Among authors: roux s. Sci Data. 2024 May 1;11(1):432. doi: 10.1038/s41597-024-03210-6. Sci Data. 2024. PMID: 38693191 Free PMC article.
Identification of mobile genetic elements with geNomad.
Camargo AP, Roux S, Schulz F, Babinski M, Xu Y, Hu B, Chain PSG, Nayfach S, Kyrpides NC. Camargo AP, et al. Among authors: roux s. Nat Biotechnol. 2024 Aug;42(8):1303-1312. doi: 10.1038/s41587-023-01953-y. Epub 2023 Sep 21. Nat Biotechnol. 2024. PMID: 37735266 Free PMC article.
Metatranscriptomes of California grassland soil microbial communities in response to rewetting.
Chuckran PF, Estera-Molina K, Huntemann M, Foster B, Roux S, Mukherjee S, Hajek P, Reddy TBK, Daum C, Chen I-MA, Pennacchio C, Eloe-Fadrosh EA, Dijkstra P, Firestone MK, Blazewicz SJ, Pett-Ridge J. Chuckran PF, et al. Among authors: roux s. Microbiol Resour Announc. 2024 Jun 11;13(6):e0032224. doi: 10.1128/mra.00322-24. Epub 2024 May 21. Microbiol Resour Announc. 2024. PMID: 38771040 Free PMC article.
Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days.
Nunn BL, Timmins-Schiffman E, Mudge MC, Plubell DL, Chebli G, Kubanek J, Riffle M, Noble WS, Harvey E, Nunn TA, Rynearson T, Huntemann M, LaButti K, Foster B, Foster B, Roux S, Palaniappan K, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen IA, Ivanova NN, Kyrpides NC, Glavina Del Rio T, Eloe-Fadrosh EA. Nunn BL, et al. Among authors: roux s. Sci Data. 2024 Nov 22;11(1):1270. doi: 10.1038/s41597-024-04013-5. Sci Data. 2024. PMID: 39578464 Free PMC article.
Author Correction: Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days.
Nunn BL, Timmins-Schiffman E, Mudge MC, Plubell DL, Chebli G, Kubanek J, Riffle M, Noble WS, Harvey E, Nunn TA, Rynearson T, Huntemann M, LaButti K, Foster B, Foster B, Roux S, Palaniappan K, Mukherjee S, Reddy TBK, Daum C, Copeland A, Chen IA, Ivanova NN, Kyrpides NC, Glavina Del Rio T, Eloe-Fadrosh EA. Nunn BL, et al. Among authors: roux s. Sci Data. 2025 Jan 20;12(1):113. doi: 10.1038/s41597-025-04445-7. Sci Data. 2025. PMID: 39833183 Free PMC article. No abstract available.
Tapping the treasure trove of atypical phages.
Roux S, Mutalik VK. Roux S, et al. Curr Opin Microbiol. 2024 Dec;82:102555. doi: 10.1016/j.mib.2024.102555. Epub 2024 Oct 10. Curr Opin Microbiol. 2024. PMID: 39388759 Free article. Review.
Astrovirology: how viruses enhance our understanding of life in the Universe.
Trubl G, Stedman KM, Bywaters KF, Matula EE, Sommers P, Roux S, Merino N, Yin J, Kaelber JT, Avila-Herrera A, Johnson PA, Johnson JC, Borges S, Weber PK, Pett-Ridge J, Boston PJ. Trubl G, et al. Among authors: roux s. Int J Astrobiol. 2023 Aug;22(4):247-271. doi: 10.1017/s1473550423000058. Epub 2023 Apr 5. Int J Astrobiol. 2023. PMID: 38046673 Free PMC article.
1,155 results