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Stochastic modelling of single-cell gene expression adaptation reveals non-genomic contribution to evolution of tumor subclones.
Hirsch MG, Pal S, Mehrabadi FR, Malikic S, Gruen C, Sassano A, Pérez-Guijarro E, Merlino G, Sahinalp C, Molloy EK, Day CP, Przytycka TM. Hirsch MG, et al. Among authors: day cp. bioRxiv [Preprint]. 2024 Apr 20:2024.04.17.588869. doi: 10.1101/2024.04.17.588869. bioRxiv. 2024. Update in: Cell Syst. 2024 Dec 18:101156. doi: 10.1016/j.cels.2024.11.013 PMID: 38712152 Free PMC article. Updated. Preprint.
Genetically engineered mouse models of melanoma.
Pérez-Guijarro E, Day CP, Merlino G, Zaidi MR. Pérez-Guijarro E, et al. Among authors: day cp. Cancer. 2017 Jun 1;123(S11):2089-2103. doi: 10.1002/cncr.30684. Cancer. 2017. PMID: 28543694 Free PMC article. Review.
Melanoblast transcriptome analysis reveals pathways promoting melanoma metastasis.
Marie KL, Sassano A, Yang HH, Michalowski AM, Michael HT, Guo T, Tsai YC, Weissman AM, Lee MP, Jenkins LM, Zaidi MR, Pérez-Guijarro E, Day CP, Ylaya K, Hewitt SM, Patel NL, Arnheiter H, Davis S, Meltzer PS, Merlino G, Mishra PJ. Marie KL, et al. Among authors: day cp. Nat Commun. 2020 Jan 16;11(1):333. doi: 10.1038/s41467-019-14085-2. Nat Commun. 2020. PMID: 31949145 Free PMC article.
PhISCS-BnB: a fast branch and bound algorithm for the perfect tumor phylogeny reconstruction problem.
Sadeqi Azer E, Rashidi Mehrabadi F, Malikić S, Li XC, Bartok O, Litchfield K, Levy R, Samuels Y, Schäffer AA, Gertz EM, Day CP, Pérez-Guijarro E, Marie K, Lee MP, Merlino G, Ergun F, Sahinalp SC. Sadeqi Azer E, et al. Among authors: day cp. Bioinformatics. 2020 Jul 1;36(Suppl_1):i169-i176. doi: 10.1093/bioinformatics/btaa464. Bioinformatics. 2020. PMID: 32657358 Free PMC article.
298 results