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Page 1
The intrinsic substrate specificity of the human tyrosine kinome.
Yaron-Barir TM, Joughin BA, Huntsman EM, Kerelsky A, Cizin DM, Cohen BM, Regev A, Song J, Vasan N, Lin TY, Orozco JM, Schoenherr C, Sagum C, Bedford MT, Wynn RM, Tso SC, Chuang DT, Li L, Li SS, Creixell P, Krismer K, Takegami M, Lee H, Zhang B, Lu J, Cossentino I, Landry SD, Uduman M, Blenis J, Elemento O, Frame MC, Hornbeck PV, Cantley LC, Turk BE, Yaffe MB, Johnson JL. Yaron-Barir TM, et al. Among authors: krismer k. Nature. 2024 May;629(8014):1174-1181. doi: 10.1038/s41586-024-07407-y. Epub 2024 May 8. Nature. 2024. PMID: 38720073 Free PMC article.
Approach to machine learning for extraction of real-world data variables from electronic health records.
Adamson B, Waskom M, Blarre A, Kelly J, Krismer K, Nemeth S, Gippetti J, Ritten J, Harrison K, Ho G, Linzmayer R, Bansal T, Wilkinson S, Amster G, Estola E, Benedum CM, Fidyk E, Estévez M, Shapiro W, Cohen AB. Adamson B, et al. Among authors: krismer k. Front Pharmacol. 2023 Sep 15;14:1180962. doi: 10.3389/fphar.2023.1180962. eCollection 2023. Front Pharmacol. 2023. PMID: 37781703 Free PMC article.
An atlas of substrate specificities for the human serine/threonine kinome.
Johnson JL, Yaron TM, Huntsman EM, Kerelsky A, Song J, Regev A, Lin TY, Liberatore K, Cizin DM, Cohen BM, Vasan N, Ma Y, Krismer K, Robles JT, van de Kooij B, van Vlimmeren AE, Andrée-Busch N, Käufer NF, Dorovkov MV, Ryazanov AG, Takagi Y, Kastenhuber ER, Goncalves MD, Hopkins BD, Elemento O, Taatjes DJ, Maucuer A, Yamashita A, Degterev A, Uduman M, Lu J, Landry SD, Zhang B, Cossentino I, Linding R, Blenis J, Hornbeck PV, Turk BE, Yaffe MB, Cantley LC. Johnson JL, et al. Among authors: krismer k. Nature. 2023 Jan;613(7945):759-766. doi: 10.1038/s41586-022-05575-3. Epub 2023 Jan 11. Nature. 2023. PMID: 36631611 Free PMC article.
IDR2D identifies reproducible genomic interactions.
Krismer K, Guo Y, Gifford DK. Krismer K, et al. Nucleic Acids Res. 2020 Apr 6;48(6):e31. doi: 10.1093/nar/gkaa030. Nucleic Acids Res. 2020. PMID: 32009147 Free PMC article.
High resolution discovery of chromatin interactions.
Guo Y, Krismer K, Closser M, Wichterle H, Gifford DK. Guo Y, et al. Among authors: krismer k. Nucleic Acids Res. 2019 Apr 8;47(6):e35. doi: 10.1093/nar/gkz051. Nucleic Acids Res. 2019. PMID: 30953075 Free PMC article.
12 results