Berjanskii M - Search Results

1

Accurate Prediction of ¹H NMR Chemical Shifts of Small Molecules Using Machine Learning.

Sajed T, Sayeeda Z, Lee BL, Berjanskii M, Wang F, Gautam V, Wishart DS. Sajed T, et al. Among authors: berjanskii m. Metabolites. 2024 May 19;14(5):290. doi: 10.3390/metabo14050290. Metabolites. 2024. PMID: 38786767 Free PMC article.

2

NMR structure of the N-terminal J domain of murine polyomavirus T antigens. Implications for DnaJ-like domains and for mutations of T antigens.

Berjanskii MV, Riley MI, Xie A, Semenchenko V, Folk WR, Van Doren SR. Berjanskii MV, et al. J Biol Chem. 2000 Nov 17;275(46):36094-103. doi: 10.1074/jbc.M006572200. J Biol Chem. 2000. PMID: 10950962 Free article.

3

Hsc70-interacting HPD loop of the J domain of polyomavirus T antigens fluctuates in ps to ns and micros to ms.

Berjanskii M, Riley M, Van Doren SR. Berjanskii M, et al. J Mol Biol. 2002 Aug 16;321(3):503-16. doi: 10.1016/s0022-2836(02)00631-9. J Mol Biol. 2002. PMID: 12162962

4

TIMP-1 contact sites and perturbations of stromelysin 1 mapped by NMR and a paramagnetic surface probe.

Arumugam S, Hemme CL, Yoshida N, Suzuki K, Nagase H, Berjanskii M, Wu B, Van Doren SR. Arumugam S, et al. Among authors: berjanskii m. Biochemistry. 1998 Jul 7;37(27):9650-7. doi: 10.1021/bi980128h. Biochemistry. 1998. PMID: 9657677

5

A simple method to predict protein flexibility using secondary chemical shifts.

Berjanskii MV, Wishart DS. Berjanskii MV, et al. J Am Chem Soc. 2005 Nov 2;127(43):14970-1. doi: 10.1021/ja054842f. J Am Chem Soc. 2005. PMID: 16248604

6

Accurate prediction of protein torsion angles using chemical shifts and sequence homology.

Neal S, Berjanskii M, Zhang H, Wishart DS. Neal S, et al. Among authors: berjanskii m. Magn Reson Chem. 2006 Jul;44 Spec No:S158-67. doi: 10.1002/mrc.1832. Magn Reson Chem. 2006. PMID: 16823900

7

PREDITOR: a web server for predicting protein torsion angle restraints.

Berjanskii MV, Neal S, Wishart DS. Berjanskii MV, et al. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W63-9. doi: 10.1093/nar/gkl341. Nucleic Acids Res. 2006. PMID: 16845087 Free PMC article.

8

NMR: prediction of protein flexibility.

Berjanskii M, Wishart DS. Berjanskii M, et al. Nat Protoc. 2006;1(2):683-8. doi: 10.1038/nprot.2006.108. Nat Protoc. 2006. PMID: 17406296

9

The RCI server: rapid and accurate calculation of protein flexibility using chemical shifts.

Berjanskii MV, Wishart DS. Berjanskii MV, et al. Nucleic Acids Res. 2007 Jul;35(Web Server issue):W531-7. doi: 10.1093/nar/gkm328. Epub 2007 May 7. Nucleic Acids Res. 2007. PMID: 17485469 Free PMC article.

10

PPT-DB: the protein property prediction and testing database.

Wishart DS, Arndt D, Berjanskii M, Guo AC, Shi Y, Shrivastava S, Zhou J, Zhou Y, Lin G. Wishart DS, et al. Among authors: berjanskii m. Nucleic Acids Res. 2008 Jan;36(Database issue):D222-9. doi: 10.1093/nar/gkm800. Epub 2007 Oct 4. Nucleic Acids Res. 2008. PMID: 17916570 Free PMC article.

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