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The complete sequence and comparative analysis of ape sex chromosomes.
Makova KD, Pickett BD, Harris RS, Hartley GA, Cechova M, Pal K, Nurk S, Yoo D, Li Q, Hebbar P, McGrath BC, Antonacci F, Aubel M, Biddanda A, Borchers M, Bornberg-Bauer E, Bouffard GG, Brooks SY, Carbone L, Carrel L, Carroll A, Chang PC, Chin CS, Cook DE, Craig SJC, de Gennaro L, Diekhans M, Dutra A, Garcia GH, Grady PGS, Green RE, Haddad D, Hallast P, Harvey WT, Hickey G, Hillis DA, Hoyt SJ, Jeong H, Kamali K, Pond SLK, LaPolice TM, Lee C, Lewis AP, Loh YE, Masterson P, McGarvey KM, McCoy RC, Medvedev P, Miga KH, Munson KM, Pak E, Paten B, Pinto BJ, Potapova T, Rhie A, Rocha JL, Ryabov F, Ryder OA, Sacco S, Shafin K, Shepelev VA, Slon V, Solar SJ, Storer JM, Sudmant PH, Sweetalana, Sweeten A, Tassia MG, Thibaud-Nissen F, Ventura M, Wilson MA, Young AC, Zeng H, Zhang X, Szpiech ZA, Huber CD, Gerton JL, Yi SV, Schatz MC, Alexandrov IA, Koren S, O'Neill RJ, Eichler EE, Phillippy AM. Makova KD, et al. Among authors: wilson ma. Nature. 2024 Jun;630(8016):401-411. doi: 10.1038/s41586-024-07473-2. Epub 2024 May 29. Nature. 2024. PMID: 38811727 Free PMC article.
Evolution and survival on eutherian sex chromosomes.
Wilson MA, Makova KD. Wilson MA, et al. PLoS Genet. 2009 Jul;5(7):e1000568. doi: 10.1371/journal.pgen.1000568. Epub 2009 Jul 17. PLoS Genet. 2009. PMID: 19609352 Free PMC article.
Genomic analyses of sex chromosome evolution.
Wilson MA, Makova KD. Wilson MA, et al. Annu Rev Genomics Hum Genet. 2009;10:333-54. doi: 10.1146/annurev-genom-082908-150105. Annu Rev Genomics Hum Genet. 2009. PMID: 19630566 Review.
Concerning the eXclusion in human genomics: The choice of sex chromosome representation in the human genome drastically affects number of identified variants.
Pinto BJ, O'Connor B, Schatz MC, Zarate S, Wilson MA. Pinto BJ, et al. Among authors: wilson ma. bioRxiv [Preprint]. 2023 Feb 22:2023.02.22.529542. doi: 10.1101/2023.02.22.529542. bioRxiv. 2023. Update in: G3 (Bethesda). 2023 Sep 30;13(10):jkad169. doi: 10.1093/g3journal/jkad169 PMID: 36865318 Free PMC article. Updated. Preprint.
The complete sequence of a human Y chromosome.
Rhie A, Nurk S, Cechova M, Hoyt SJ, Taylor DJ, Altemose N, Hook PW, Koren S, Rautiainen M, Alexandrov IA, Allen J, Asri M, Bzikadze AV, Chen NC, Chin CS, Diekhans M, Flicek P, Formenti G, Fungtammasan A, Garcia Giron C, Garrison E, Gershman A, Gerton JL, Grady PGS, Guarracino A, Haggerty L, Halabian R, Hansen NF, Harris R, Hartley GA, Harvey WT, Haukness M, Heinz J, Hourlier T, Hubley RM, Hunt SE, Hwang S, Jain M, Kesharwani RK, Lewis AP, Li H, Logsdon GA, Lucas JK, Makalowski W, Markovic C, Martin FJ, Mc Cartney AM, McCoy RC, McDaniel J, McNulty BM, Medvedev P, Mikheenko A, Munson KM, Murphy TD, Olsen HE, Olson ND, Paulin LF, Porubsky D, Potapova T, Ryabov F, Salzberg SL, Sauria MEG, Sedlazeck FJ, Shafin K, Shepelev VA, Shumate A, Storer JM, Surapaneni L, Taravella Oill AM, Thibaud-Nissen F, Timp W, Tomaszkiewicz M, Vollger MR, Walenz BP, Watwood AC, Weissensteiner MH, Wenger AM, Wilson MA, Zarate S, Zhu Y, Zook JM, Eichler EE, O'Neill RJ, Schatz MC, Miga KH, Makova KD, Phillippy AM. Rhie A, et al. Among authors: wilson ma. Nature. 2023 Sep;621(7978):344-354. doi: 10.1038/s41586-023-06457-y. Epub 2023 Aug 23. Nature. 2023. PMID: 37612512 Free PMC article.
It's a Trap?! Escape from an ancient, ancestral sex chromosome system and implication of Foxl2 as the putative primary sex determining gene in a lizard (Anguimorpha; Shinisauridae).
Pinto BJ, Nielsen SV, Sullivan KA, Behere A, Keating SE, van Schingen-Khan M, Nguyen TQ, Ziegler T, Pramuk J, Wilson MA, Gamble T. Pinto BJ, et al. Among authors: wilson ma. bioRxiv [Preprint]. 2023 Oct 26:2023.07.05.547803. doi: 10.1101/2023.07.05.547803. bioRxiv. 2023. Update in: Evolution. 2024 Feb 1;78(2):355-363. doi: 10.1093/evolut/qpad205 PMID: 37461522 Free PMC article. Updated. Preprint.
Evolutionary and biomedical implications of sex differences in the primate brain transcriptome.
DeCasien AR, Chiou KL, Testard C, Mercer A, Negrón-Del Valle JE, Bauman Surratt SE, González O, Stock MK, Ruiz-Lambides AV, Martínez MI; Cayo Biobank Research Unit; Antón SC, Walker CS, Sallet J, Wilson MA, Brent LJN, Montague MJ, Sherwood CC, Platt ML, Higham JP, Snyder-Mackler N. DeCasien AR, et al. Among authors: wilson ma. Cell Genom. 2024 Jul 10;4(7):100589. doi: 10.1016/j.xgen.2024.100589. Epub 2024 Jun 27. Cell Genom. 2024. PMID: 38942023 Free PMC article.
Toward a deeper understanding of gene-by-sex interaction models.
Khramtsova EA, Winham SJ, Davis LK, Stranger BE, Wilson MA. Khramtsova EA, et al. Among authors: wilson ma. Cell Genom. 2023 May 10;3(5):100324. doi: 10.1016/j.xgen.2023.100324. eCollection 2023 May 10. Cell Genom. 2023. PMID: 37228751 Free PMC article.
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