Wu WS - Search Results

1

BAPCP: A comprehensive and user-friendly web tool for identifying biomarkers from protein microarray technologies.

Yang TH, Syu GD, Chen CS, Chen GR, Jhong SE, Lin PH, Lin PC, Wang YC, Shah P, Tseng YY, Wu WS. Yang TH, et al. Among authors: wu ws. Comput Methods Programs Biomed. 2024 Sep;254:108260. doi: 10.1016/j.cmpb.2024.108260. Epub 2024 May 31. Comput Methods Programs Biomed. 2024. PMID: 38878357

2

Identifying biologically interpretable transcription factor knockout targets by jointly analyzing the transcription factor knockout microarray and the ChIP-chip data.

Yang TH, Wu WS. Yang TH, et al. Among authors: wu ws. BMC Syst Biol. 2012 Aug 16;6:102. doi: 10.1186/1752-0509-6-102. BMC Syst Biol. 2012. PMID: 22898448 Free PMC article.

3

YGMD: a repository for yeast cooperative transcription factor sets and their target gene modules.

Wu WS, Chen PH, Chen TT, Tseng YY. Wu WS, et al. Database (Oxford). 2017 Jan 1;2017:bax085. doi: 10.1093/database/bax085. Database (Oxford). 2017. PMID: 29220473 Free PMC article.

4

Systematical Analysis of the Protein Targets of Lactoferricin B and Histatin-5 Using Yeast Proteome Microarrays.

Shah P, Wu WS, Chen CS. Shah P, et al. Among authors: wu ws. Int J Mol Sci. 2019 Aug 28;20(17):4218. doi: 10.3390/ijms20174218. Int J Mol Sci. 2019. PMID: 31466342 Free PMC article.

5

YQFC: a web tool to compare quantitative biological features between two yeast gene lists.

Wu WS, Wang LJ, Yen HC, Tseng YY. Wu WS, et al. Database (Oxford). 2020 Jan 1;2020:baaa076. doi: 10.1093/database/baaa076. Database (Oxford). 2020. PMID: 33186464 Free PMC article.

6

YPIBP: A repository for phosphoinositide-binding proteins in yeast.

Rathod J, Yen HC, Liang B, Tseng YY, Chen CS, Wu WS. Rathod J, et al. Among authors: wu ws. Comput Struct Biotechnol J. 2021 Jun 24;19:3692-3707. doi: 10.1016/j.csbj.2021.06.035. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 34285772 Free PMC article.

7

Cancer DEIso: An integrative analysis platform for investigating differentially expressed gene-level and isoform-level human cancer markers.

Yang TH, Chiang YH, Shiue SC, Lin PH, Yang YC, Tu KC, Tseng YY, Tseng JT, Wu WS. Yang TH, et al. Among authors: wu ws. Comput Struct Biotechnol J. 2021 Sep 8;19:5149-5159. doi: 10.1016/j.csbj.2021.09.005. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 34589189 Free PMC article.

8

Identifying piRNA targets on mRNAs in C. elegans using a deep multi-head attention network.

Yang TH, Shiue SC, Chen KY, Tseng YY, Wu WS. Yang TH, et al. Among authors: wu ws. BMC Bioinformatics. 2021 Oct 16;22(1):503. doi: 10.1186/s12859-021-04428-6. BMC Bioinformatics. 2021. PMID: 34656087 Free PMC article.

9

KDmarkers: A biomarker database for investigating epigenetic methylation and gene expression levels in Kawasaki disease.

Wu WS, Yang TH, Chen KD, Lin PH, Chen GR, Kuo HC. Wu WS, et al. Comput Struct Biotechnol J. 2022 Mar 10;20:1295-1305. doi: 10.1016/j.csbj.2022.02.032. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 35356542 Free PMC article.

10

YMLA: A comparative platform to carry out functional enrichment analysis for multiple gene lists in yeast.

Yang TH, Hsu CW, Wang YX, Yu CH, Rathod J, Tseng YY, Wu WS. Yang TH, et al. Among authors: wu ws. Comput Biol Med. 2022 Dec;151(Pt B):106314. doi: 10.1016/j.compbiomed.2022.106314. Epub 2022 Nov 14. Comput Biol Med. 2022. PMID: 36455295

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