Yang TH - Search Results

1

BAPCP: A comprehensive and user-friendly web tool for identifying biomarkers from protein microarray technologies.

Yang TH, Syu GD, Chen CS, Chen GR, Jhong SE, Lin PH, Lin PC, Wang YC, Shah P, Tseng YY, Wu WS. Yang TH, et al. Comput Methods Programs Biomed. 2024 Sep;254:108260. doi: 10.1016/j.cmpb.2024.108260. Epub 2024 May 31. Comput Methods Programs Biomed. 2024. PMID: 38878357

2

Identifying biologically interpretable transcription factor knockout targets by jointly analyzing the transcription factor knockout microarray and the ChIP-chip data.

Yang TH, Wu WS. Yang TH, et al. BMC Syst Biol. 2012 Aug 16;6:102. doi: 10.1186/1752-0509-6-102. BMC Syst Biol. 2012. PMID: 22898448 Free PMC article.

3

Identifying functional transcription factor binding sites in yeast by considering their positional preference in the promoters.

Lai FJ, Chiu CC, Yang TH, Huang YM, Wu WS. Lai FJ, et al. Among authors: yang th. PLoS One. 2013 Dec 26;8(12):e83791. doi: 10.1371/journal.pone.0083791. eCollection 2013. PLoS One. 2013. PMID: 24386279 Free PMC article.

4

Inferring functional transcription factor-gene binding pairs by integrating transcription factor binding data with transcription factor knockout data.

Yang TH, Wu WS. Yang TH, et al. BMC Syst Biol. 2013;7 Suppl 6(Suppl 6):S13. doi: 10.1186/1752-0509-7-S6-S13. Epub 2013 Dec 13. BMC Syst Biol. 2013. PMID: 24565265 Free PMC article.

5

YTRP: a repository for yeast transcriptional regulatory pathways.

Yang TH, Wang CC, Wang YC, Wu WS. Yang TH, et al. Database (Oxford). 2014 Mar 7;2014:bau014. doi: 10.1093/database/bau014. Print 2014. Database (Oxford). 2014. PMID: 24608172 Free PMC article.

6

iPhos: a toolkit to streamline the alkaline phosphatase-assisted comprehensive LC-MS phosphoproteome investigation.

Yang TH, Chang HT, Hsiao ES, Sun JL, Wang CC, Wu HY, Liao PC, Wu WS. Yang TH, et al. BMC Bioinformatics. 2014;15 Suppl 16(Suppl 16):S10. doi: 10.1186/1471-2105-15-S16-S10. Epub 2014 Dec 8. BMC Bioinformatics. 2014. PMID: 25521246 Free PMC article.

7

cisMEP: an integrated repository of genomic epigenetic profiles and cis-regulatory modules in Drosophila.

Yang TH, Wang CC, Hung PC, Wu WS. Yang TH, et al. BMC Syst Biol. 2014;8 Suppl 4(Suppl 4):S8. doi: 10.1186/1752-0509-8-S4-S8. Epub 2014 Dec 8. BMC Syst Biol. 2014. PMID: 25521507 Free PMC article.

8

The Yeast Nucleosome Atlas (YNA) database: an integrative gene mining platform for studying chromatin structure and its regulation in yeast.

Hung PC, Yang TH, Liaw HJ, Wu WS. Hung PC, et al. Among authors: yang th. BMC Genomics. 2014;15 Suppl 9(Suppl 9):S5. doi: 10.1186/1471-2164-15-S9-S5. Epub 2014 Dec 8. BMC Genomics. 2014. PMID: 25522035 Free PMC article.

9

Cancer DEIso: An integrative analysis platform for investigating differentially expressed gene-level and isoform-level human cancer markers.

Yang TH, Chiang YH, Shiue SC, Lin PH, Yang YC, Tu KC, Tseng YY, Tseng JT, Wu WS. Yang TH, et al. Among authors: yang yc. Comput Struct Biotechnol J. 2021 Sep 8;19:5149-5159. doi: 10.1016/j.csbj.2021.09.005. eCollection 2021. Comput Struct Biotechnol J. 2021. PMID: 34589189 Free PMC article.

10

Identifying piRNA targets on mRNAs in C. elegans using a deep multi-head attention network.

Yang TH, Shiue SC, Chen KY, Tseng YY, Wu WS. Yang TH, et al. BMC Bioinformatics. 2021 Oct 16;22(1):503. doi: 10.1186/s12859-021-04428-6. BMC Bioinformatics. 2021. PMID: 34656087 Free PMC article.

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