Panda K - Search Results

1

Transposase-assisted target-site integration for efficient plant genome engineering.

Liu P, Panda K, Edwards SA, Swanson R, Yi H, Pandesha P, Hung YH, Klaas G, Ye X, Collins MV, Renken KN, Gilbertson LA, Veena V, Hancock CN, Slotkin RK. Liu P, et al. Among authors: panda k. Nature. 2024 Jul;631(8021):593-600. doi: 10.1038/s41586-024-07613-8. Epub 2024 Jun 26. Nature. 2024. PMID: 38926583 Free PMC article.

2

Long-Read cDNA Sequencing Enables a "Gene-Like" Transcript Annotation of Transposable Elements.

Panda K, Slotkin RK. Panda K, et al. Plant Cell. 2020 Sep;32(9):2687-2698. doi: 10.1105/tpc.20.00115. Epub 2020 Jul 9. Plant Cell. 2020. PMID: 32647069 Free PMC article.

3

A plant tethering system for the functional study of protein-RNA interactions in vivo.

Cuerda-Gil D, Hung YH, Panda K, Slotkin RK. Cuerda-Gil D, et al. Among authors: panda k. Plant Methods. 2022 Jun 4;18(1):75. doi: 10.1186/s13007-022-00907-w. Plant Methods. 2022. PMID: 35658900 Free PMC article.

4

Silencing in sperm cells is directed by RNA movement from the surrounding nurse cell.

Martínez G, Panda K, Köhler C, Slotkin RK. Martínez G, et al. Among authors: panda k. Nat Plants. 2016 Mar 21;2:16030. doi: 10.1038/nplants.2016.30. Nat Plants. 2016. PMID: 27249563

5

Arabidopsis RNA Polymerase IV generates 21-22 nucleotide small RNAs that can participate in RNA-directed DNA methylation and may regulate genes.

Panda K, McCue AD, Slotkin RK. Panda K, et al. Philos Trans R Soc Lond B Biol Sci. 2020 Mar 30;375(1795):20190417. doi: 10.1098/rstb.2019.0417. Epub 2020 Feb 10. Philos Trans R Soc Lond B Biol Sci. 2020. PMID: 32075560 Free PMC article.

6

An siRNA-guided ARGONAUTE protein directs RNA polymerase V to initiate DNA methylation.

Sigman MJ, Panda K, Kirchner R, McLain LL, Payne H, Peasari JR, Husbands AY, Slotkin RK, McCue AD. Sigman MJ, et al. Among authors: panda k. Nat Plants. 2021 Nov;7(11):1461-1474. doi: 10.1038/s41477-021-01008-7. Epub 2021 Nov 8. Nat Plants. 2021. PMID: 34750500 Free PMC article.

7

The RNA Export Factor ALY1 Enables Genome-Wide RNA-Directed DNA Methylation.

Choudury SG, Shahid S, Cuerda-Gil D, Panda K, Cullen A, Ashraf Q, Sigman MJ, McCue AD, Slotkin RK. Choudury SG, et al. Among authors: panda k. Plant Cell. 2019 Apr;31(4):759-774. doi: 10.1105/tpc.18.00624. Epub 2019 Feb 27. Plant Cell. 2019. PMID: 30814259 Free PMC article.

8

The plant response to high CO₂ levels is heritable and orchestrated by DNA methylation.

Panda K, Mohanasundaram B, Gutierrez J, McLain L, Castillo SE, Sheng H, Casto A, Gratacós G, Chakrabarti A, Fahlgren N, Pandey S, Gehan MA, Slotkin RK. Panda K, et al. New Phytol. 2023 Jun;238(6):2427-2439. doi: 10.1111/nph.18876. Epub 2023 Mar 28. New Phytol. 2023. PMID: 36918471 Free article.

9

High expression in maize pollen correlates with genetic contributions to pollen fitness as well as with coordinated transcription from neighboring transposable elements.

Warman C, Panda K, Vejlupkova Z, Hokin S, Unger-Wallace E, Cole RA, Chettoor AM, Jiang D, Vollbrecht E, Evans MMS, Slotkin RK, Fowler JE. Warman C, et al. Among authors: panda k. PLoS Genet. 2020 Apr 1;16(4):e1008462. doi: 10.1371/journal.pgen.1008462. eCollection 2020 Apr. PLoS Genet. 2020. PMID: 32236090 Free PMC article.

10

Proposed mechanism for the initiation of transposable element silencing by the RDR6-directed DNA methylation pathway.

Panda K, Slotkin RK. Panda K, et al. Plant Signal Behav. 2013 Aug;8(8):e25206. doi: 10.4161/psb.25206. Epub 2013 Jun 5. Plant Signal Behav. 2013. PMID: 23759554 Free PMC article.

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