Skowronek K - Search Results

1

Structural analysis of the BisI family of modification dependent restriction endonucleases.

Szafran K, Rafalski D, Skowronek K, Wojciechowski M, Kazrani AA, Gilski M, Xu SY, Bochtler M. Szafran K, et al. Among authors: skowronek k. Nucleic Acids Res. 2024 Aug 27;52(15):9103-9118. doi: 10.1093/nar/gkae634. Nucleic Acids Res. 2024. PMID: 39041409 Free PMC article.

2

Crystal structure and mechanism of action of the N6-methyladenine-dependent type IIM restriction endonuclease R.DpnI.

Siwek W, Czapinska H, Bochtler M, Bujnicki JM, Skowronek K. Siwek W, et al. Among authors: skowronek k. Nucleic Acids Res. 2012 Aug;40(15):7563-72. doi: 10.1093/nar/gks428. Epub 2012 May 18. Nucleic Acids Res. 2012. PMID: 22610857 Free PMC article.

3

Structural basis of the methylation specificity of R.DpnI.

Mierzejewska K, Siwek W, Czapinska H, Kaus-Drobek M, Radlinska M, Skowronek K, Bujnicki JM, Dadlez M, Bochtler M. Mierzejewska K, et al. Among authors: skowronek k. Nucleic Acids Res. 2014 Jul;42(13):8745-54. doi: 10.1093/nar/gku546. Epub 2014 Jun 25. Nucleic Acids Res. 2014. PMID: 24966351 Free PMC article.

4

In Vitro Directed Evolution of a Restriction Endonuclease with More Stringent Specificity.

Skowronek KJ, Bochtler M. Skowronek KJ, et al. J Vis Exp. 2020 Mar 25;(157). doi: 10.3791/60807. J Vis Exp. 2020. PMID: 32281972

5

Crystal Structure and Directed Evolution of Specificity of NlaIV Restriction Endonuclease.

Czapinska H, Siwek W, Szczepanowski RH, Bujnicki JM, Bochtler M, Skowronek KJ. Czapinska H, et al. J Mol Biol. 2019 May 17;431(11):2082-2094. doi: 10.1016/j.jmb.2019.04.010. Epub 2019 Apr 14. J Mol Biol. 2019. PMID: 30995450 Free article.

6

Inference of relationships in the 'twilight zone' of homology using a combination of bioinformatics and site-directed mutagenesis: a case study of restriction endonucleases Bsp6I and PvuII.

Pawlak SD, Radlinska M, Chmiel AA, Bujnicki JM, Skowronek KJ. Pawlak SD, et al. Nucleic Acids Res. 2005 Jan 31;33(2):661-71. doi: 10.1093/nar/gki213. Print 2005. Nucleic Acids Res. 2005. PMID: 15684412 Free PMC article.

7

Rational engineering of sequence specificity in R.MwoI restriction endonuclease.

Skowronek K, Boniecki MJ, Kluge B, Bujnicki JM. Skowronek K, et al. Nucleic Acids Res. 2012 Sep 1;40(17):8579-92. doi: 10.1093/nar/gks570. Epub 2012 Jun 25. Nucleic Acids Res. 2012. PMID: 22735699 Free PMC article.

8

Structures of annexin A2-PS DNA complexes show dominance of hydrophobic interactions in phosphorothioate binding.

Hyjek-Składanowska M, Anderson BA, Mykhaylyk V, Orr C, Wagner A, Poznański JT, Skowronek K, Seth P, Nowotny M. Hyjek-Składanowska M, et al. Among authors: skowronek k. Nucleic Acids Res. 2023 Feb 22;51(3):1409-1423. doi: 10.1093/nar/gkac774. Nucleic Acids Res. 2023. PMID: 36124719 Free PMC article.

9

Delineation of structural domains and identification of functionally important residues in DNA repair enzyme exonuclease VII.

Poleszak K, Kaminska KH, Dunin-Horkawicz S, Lupas A, Skowronek KJ, Bujnicki JM. Poleszak K, et al. Among authors: skowronek kj. Nucleic Acids Res. 2012 Sep;40(16):8163-74. doi: 10.1093/nar/gks547. Epub 2012 Jun 20. Nucleic Acids Res. 2012. PMID: 22718974 Free PMC article.

10

Mechanism of protein-primed template-independent DNA synthesis by Abi polymerases.

Figiel M, Gapińska M, Czarnocki-Cieciura M, Zajko W, Sroka M, Skowronek K, Nowotny M. Figiel M, et al. Among authors: skowronek k. Nucleic Acids Res. 2022 Sep 23;50(17):10026-10040. doi: 10.1093/nar/gkac772. Nucleic Acids Res. 2022. PMID: 36107766 Free PMC article.

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