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AssemblyQC: a Nextflow pipeline for reproducible reporting of assembly quality.
Rashid U, Wu C, Shiller J, Smith K, Crowhurst R, Davy M, Chen TH, Carvajal I, Bailey S, Thomson S, Deng CH. Rashid U, et al. Among authors: shiller j. Bioinformatics. 2024 Aug 2;40(8):btae477. doi: 10.1093/bioinformatics/btae477. Bioinformatics. 2024. PMID: 39078114 Free PMC article.
Chromosome-level assembly of the Phytophthora agathidicida genome reveals adaptation in effector gene families.
Cox MP, Guo Y, Winter DJ, Sen D, Cauldron NC, Shiller J, Bradley EL, Ganley AR, Gerth ML, Lacey RF, McDougal RL, Panda P, Williams NM, Grunwald NJ, Mesarich CH, Bradshaw RE. Cox MP, et al. Among authors: shiller j. Front Microbiol. 2022 Nov 2;13:1038444. doi: 10.3389/fmicb.2022.1038444. eCollection 2022. Front Microbiol. 2022. PMID: 36406440 Free PMC article.
Draft Genome Sequence of the Environmental Fungus Scedosporium dehoogii.
Shiller J, Duvaux L, Vandeputte P, Lemaire C, Rougeron A, De Bernonville TD, Giraud S, Le Cam B, Bouchara JP, Gastebois A. Shiller J, et al. Mycopathologia. 2021 Dec;186(6):889-892. doi: 10.1007/s11046-021-00582-w. Epub 2021 Sep 27. Mycopathologia. 2021. PMID: 34570289
28 results