Yaffe MB - Search Results

1

The Fanconi anemia core complex promotes CtIP-dependent end resection to drive homologous recombination at DNA double-strand breaks.

van de Kooij B, van der Wal FJ, Rother MB, Wiegant WW, Creixell P, Stout M, Joughin BA, Vornberger J, Altmeyer M, van Vugt MATM, Yaffe MB, van Attikum H. van de Kooij B, et al. Among authors: yaffe mb. Nat Commun. 2024 Aug 16;15(1):7076. doi: 10.1038/s41467-024-51090-6. Nat Commun. 2024. PMID: 39152113 Free PMC article.

2

Multi-pathway DNA-repair reporters reveal competition between end-joining, single-strand annealing and homologous recombination at Cas9-induced DNA double-strand breaks.

van de Kooij B, Kruswick A, van Attikum H, Yaffe MB. van de Kooij B, et al. Among authors: yaffe mb. Nat Commun. 2022 Sep 8;13(1):5295. doi: 10.1038/s41467-022-32743-w. Nat Commun. 2022. PMID: 36075911 Free PMC article.

3

14-3-3sigma controls mitotic translation to facilitate cytokinesis.

Wilker EW, van Vugt MA, Artim SA, Huang PH, Petersen CP, Reinhardt HC, Feng Y, Sharp PA, Sonenberg N, White FM, Yaffe MB. Wilker EW, et al. Among authors: yaffe mb. Nature. 2007 Mar 15;446(7133):329-32. doi: 10.1038/nature05584. Nature. 2007. PMID: 17361185

4

Cell cycle re-entry mechanisms after DNA damage checkpoints: giving it some gas to shut off the breaks!

van Vugt MA, Yaffe MB. van Vugt MA, et al. Among authors: yaffe mb. Cell Cycle. 2010 Jun 1;9(11):2097-101. doi: 10.4161/cc.9.11.11840. Epub 2010 Jun 1. Cell Cycle. 2010. PMID: 20505366 Review.

5

ROS and Oxidative Stress Are Elevated in Mitosis during Asynchronous Cell Cycle Progression and Are Exacerbated by Mitotic Arrest.

Patterson JC, Joughin BA, van de Kooij B, Lim DC, Lauffenburger DA, Yaffe MB. Patterson JC, et al. Among authors: yaffe mb. Cell Syst. 2019 Feb 27;8(2):163-167.e2. doi: 10.1016/j.cels.2019.01.005. Epub 2019 Feb 20. Cell Syst. 2019. PMID: 30797774 Free PMC article.

6

The intrinsic substrate specificity of the human tyrosine kinome.

Yaron-Barir TM, Joughin BA, Huntsman EM, Kerelsky A, Cizin DM, Cohen BM, Regev A, Song J, Vasan N, Lin TY, Orozco JM, Schoenherr C, Sagum C, Bedford MT, Wynn RM, Tso SC, Chuang DT, Li L, Li SS, Creixell P, Krismer K, Takegami M, Lee H, Zhang B, Lu J, Cossentino I, Landry SD, Uduman M, Blenis J, Elemento O, Frame MC, Hornbeck PV, Cantley LC, Turk BE, Yaffe MB, Johnson JL. Yaron-Barir TM, et al. Among authors: yaffe mb. Nature. 2024 May;629(8014):1174-1181. doi: 10.1038/s41586-024-07407-y. Epub 2024 May 8. Nature. 2024. PMID: 38720073 Free PMC article.

7

Comprehensive substrate specificity profiling of the human Nek kinome reveals unexpected signaling outputs.

van de Kooij B, Creixell P, van Vlimmeren A, Joughin BA, Miller CJ, Haider N, Simpson CD, Linding R, Stambolic V, Turk BE, Yaffe MB. van de Kooij B, et al. Among authors: yaffe mb. Elife. 2019 May 24;8:e44635. doi: 10.7554/eLife.44635. Elife. 2019. PMID: 31124786 Free PMC article.

8

The injury response to DNA damage in live tumor cells promotes antitumor immunity.

Sriram G, Milling LE, Chen JK, Kong YW, Joughin BA, Abraham W, Swartwout S, Handly ED, Irvine DJ, Yaffe MB. Sriram G, et al. Among authors: yaffe mb. Sci Signal. 2021 Oct 19;14(705):eabc4764. doi: 10.1126/scisignal.abc4764. Epub 2021 Oct 19. Sci Signal. 2021. PMID: 34665642 Free PMC article.

9

A computational method for the analysis and prediction of protein:phosphopeptide-binding sites.

Joughin BA, Tidor B, Yaffe MB. Joughin BA, et al. Among authors: yaffe mb. Protein Sci. 2005 Jan;14(1):131-9. doi: 10.1110/ps.04964705. Epub 2004 Dec 2. Protein Sci. 2005. PMID: 15576564 Free PMC article.

10

Transite: A Computational Motif-Based Analysis Platform That Identifies RNA-Binding Proteins Modulating Changes in Gene Expression.

Krismer K, Bird MA, Varmeh S, Handly ED, Gattinger A, Bernwinkler T, Anderson DA, Heinzel A, Joughin BA, Kong YW, Cannell IG, Yaffe MB. Krismer K, et al. Among authors: yaffe mb. Cell Rep. 2020 Aug 25;32(8):108064. doi: 10.1016/j.celrep.2020.108064. Cell Rep. 2020. PMID: 32846122 Free PMC article.

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