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Analyzing cell-type-specific dynamics of metabolism in kidney repair.
Wang G, Heijs B, Kostidis S, Mahfouz A, Rietjens RGJ, Bijkerk R, Koudijs A, van der Pluijm LAK, van den Berg CW, Dumas SJ, Carmeliet P, Giera M, van den Berg BM, Rabelink TJ. Wang G, et al. Among authors: mahfouz a. Nat Metab. 2022 Sep;4(9):1109-1118. doi: 10.1038/s42255-022-00615-8. Epub 2022 Aug 25. Nat Metab. 2022. PMID: 36008550 Free PMC article.
Predicting Cell Populations in Single Cell Mass Cytometry Data.
Abdelaal T, van Unen V, Höllt T, Koning F, Reinders MJT, Mahfouz A. Abdelaal T, et al. Among authors: mahfouz a. Cytometry A. 2019 Jul;95(7):769-781. doi: 10.1002/cyto.a.23738. Epub 2019 Mar 12. Cytometry A. 2019. PMID: 30861637 Free PMC article.
SCHNEL: scalable clustering of high dimensional single-cell data.
Abdelaal T, de Raadt P, Lelieveldt BPF, Reinders MJT, Mahfouz A. Abdelaal T, et al. Among authors: mahfouz a. Bioinformatics. 2020 Dec 30;36(Suppl_2):i849-i856. doi: 10.1093/bioinformatics/btaa816. Bioinformatics. 2020. PMID: 33381821
scMoC: single-cell multi-omics clustering.
Eltager M, Abdelaal T, Mahfouz A, Reinders MJT. Eltager M, et al. Among authors: mahfouz a. Bioinform Adv. 2022 Feb 15;2(1):vbac011. doi: 10.1093/bioadv/vbac011. eCollection 2022. Bioinform Adv. 2022. PMID: 36699396 Free PMC article.
SIRV: spatial inference of RNA velocity at the single-cell resolution.
Abdelaal T, Grossouw LM, Pasterkamp RJ, Lelieveldt BPF, Reinders MJT, Mahfouz A. Abdelaal T, et al. Among authors: mahfouz a. NAR Genom Bioinform. 2024 Aug 6;6(3):lqae100. doi: 10.1093/nargab/lqae100. eCollection 2024 Sep. NAR Genom Bioinform. 2024. PMID: 39108639 Free PMC article.
332 results