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Page 1
Mapping enhancer-gene regulatory interactions from single-cell data.
Sheth MU, Qiu WL, Rosa Ma X, Gschwind AR, Jagoda E, Tan AS, Einarsson H, Gorissen BL, Dubocanin D, McGinnis CS, Amgalan D, Satpathy AT, Jones TR, Steinmetz LM, Kundaje A, Ustun B, Engreitz JM, Andersson R. Sheth MU, et al. Among authors: dubocanin d. bioRxiv [Preprint]. 2024 Nov 24:2024.11.23.624931. doi: 10.1101/2024.11.23.624931. bioRxiv. 2024. PMID: 39605382 Free PMC article. Preprint.
Single-molecule states link transcription factor binding to gene expression.
Doughty BR, Hinks MM, Schaepe JM, Marinov GK, Thurm AR, Rios-Martinez C, Parks BE, Tan Y, Marklund E, Dubocanin D, Bintu L, Greenleaf WJ. Doughty BR, et al. Among authors: dubocanin d. Nature. 2024 Dec;636(8043):745-754. doi: 10.1038/s41586-024-08219-w. Epub 2024 Nov 20. Nature. 2024. PMID: 39567683
Centromeric transposable elements and epigenetic status drive karyotypic variation in the eastern hoolock gibbon.
Hartley GA, Okhovat M, Hoyt SJ, Fuller E, Pauloski N, Alexandre N, Alexandrov I, Drennan R, Dubocanin D, Gilbert DM, Mao Y, McCann C, Neph S, Ryabov F, Sasaki T, Storer JM, Svendsen D, Troy W, Wells J, Core L, Stergachis A, Carbone L, O'Neill RJ. Hartley GA, et al. Among authors: dubocanin d. bioRxiv [Preprint]. 2024 Aug 30:2024.08.29.610280. doi: 10.1101/2024.08.29.610280. bioRxiv. 2024. PMID: 39257810 Free PMC article. Preprint.
Single-molecule chromatin configurations link transcription factor binding to expression in human cells.
Doughty BR, Hinks MM, Schaepe JM, Marinov GK, Thurm AR, Rios-Martinez C, Parks BE, Tan Y, Marklund E, Dubocanin D, Bintu L, Greenleaf WJ. Doughty BR, et al. Among authors: dubocanin d. bioRxiv [Preprint]. 2024 Feb 4:2024.02.02.578660. doi: 10.1101/2024.02.02.578660. bioRxiv. 2024. Update in: Nature. 2024 Dec;636(8043):745-754. doi: 10.1038/s41586-024-08219-w PMID: 38352517 Free PMC article. Updated. Preprint.
12 results