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Page 1
Centromeric transposable elements and epigenetic status drive karyotypic variation in the eastern hoolock gibbon.
Hartley GA, Okhovat M, Hoyt SJ, Fuller E, Pauloski N, Alexandre N, Alexandrov I, Drennan R, Dubocanin D, Gilbert DM, Mao Y, McCann C, Neph S, Ryabov F, Sasaki T, Storer JM, Svendsen D, Troy W, Wells J, Core L, Stergachis A, Carbone L, O'Neill RJ. Hartley GA, et al. Among authors: stergachis a. bioRxiv [Preprint]. 2024 Aug 30:2024.08.29.610280. doi: 10.1101/2024.08.29.610280. bioRxiv. 2024. PMID: 39257810 Free PMC article. Preprint.
DNA-m6A calling and integrated long-read epigenetic and genetic analysis with fibertools.
Jha A, Bohaczuk SC, Mao Y, Ranchalis J, Mallory BJ, Min AT, Hamm MO, Swanson E, Dubocanin D, Finkbeiner C, Li T, Whittington D, Noble WS, Stergachis AB, Vollger MR. Jha A, et al. Among authors: stergachis ab. bioRxiv [Preprint]. 2023 Dec 11:2023.04.20.537673. doi: 10.1101/2023.04.20.537673. bioRxiv. 2023. Update in: Genome Res. 2024 Nov 20;34(11):1976-1986. doi: 10.1101/gr.279095.124 PMID: 37131601 Free PMC article. Updated. Preprint.
The regulatory potential of transposable elements in maize.
Bubb KL, Hamm MO, Min JK, Ramirez-Corona B, Mueth NA, Ranchalis J, Vollger MR, Trapnell C, Cuperus JT, Queitsch C, Stergachis AB. Bubb KL, et al. Among authors: stergachis ab. bioRxiv [Preprint]. 2024 Jul 14:2024.07.10.602892. doi: 10.1101/2024.07.10.602892. bioRxiv. 2024. PMID: 39026747 Free PMC article. Preprint.
Resolving the chromatin impact of mosaic variants with targeted Fiber-seq.
Bohaczuk SC, Amador ZJ, Li C, Mallory BJ, Swanson EG, Ranchalis J, Vollger MR, Munson KM, Walsh T, Hamm MO, Mao Y, Lieber A, Stergachis AB. Bohaczuk SC, et al. Among authors: stergachis ab. bioRxiv [Preprint]. 2024 Jul 13:2024.07.09.602608. doi: 10.1101/2024.07.09.602608. bioRxiv. 2024. Update in: Genome Res. 2024 Dec 23;34(12):2269-2278. doi: 10.1101/gr.279747.124 PMID: 39026856 Free PMC article. Updated. Preprint.
Resolving the chromatin impact of mosaic variants with targeted Fiber-seq.
Bohaczuk SC, Amador ZJ, Li C, Mallory BJ, Swanson EG, Ranchalis J, Vollger MR, Munson KM, Walsh T, Hamm MO, Mao Y, Lieber A, Stergachis AB. Bohaczuk SC, et al. Among authors: stergachis ab. Genome Res. 2024 Dec 23;34(12):2269-2278. doi: 10.1101/gr.279747.124. Genome Res. 2024. PMID: 39653420
Personal and population genomics of human regulatory variation.
Vernot B, Stergachis AB, Maurano MT, Vierstra J, Neph S, Thurman RE, Stamatoyannopoulos JA, Akey JM. Vernot B, et al. Among authors: stergachis ab. Genome Res. 2012 Sep;22(9):1689-97. doi: 10.1101/gr.134890.111. Genome Res. 2012. PMID: 22955981 Free PMC article.
300 results