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Clearing the plate: a strategic approach to mitigate well-to-well contamination in large-scale microbiome studies.
Brennan C, Belda-Ferre P, Zuffa S, Charron-Lamoureux V, Mohanty I, Ackermann G, Allaband C, Ambre M, Boyer T, Bryant M, Cantrell K, Gonzalez A, McDonald D, Salido RA, Song SJ, Wright G, Dorrestein PC, Knight R. Brennan C, et al. Among authors: allaband c. mSystems. 2024 Oct 22;9(10):e0098524. doi: 10.1128/msystems.00985-24. Epub 2024 Sep 16. mSystems. 2024. PMID: 39283083 Free PMC article.
Impact of diet change on the gut microbiome of common marmosets (Callithrix jacchus).
Tang-Wing C, Mohanty I, Bryant M, Makowski K, Melendez D, Dorrestein PC, Knight R, Caraballo-Rodríguez AM, Allaband C, Jenné K. Tang-Wing C, et al. Among authors: allaband c. mSystems. 2024 Aug 20;9(8):e0010824. doi: 10.1128/msystems.00108-24. Epub 2024 Jul 8. mSystems. 2024. PMID: 38975760 Free PMC article.
Time of sample collection is critical for the replicability of microbiome analyses.
Allaband C, Lingaraju A, Flores Ramos S, Kumar T, Javaheri H, Tiu MD, Dantas Machado AC, Richter RA, Elijah E, Haddad GG, Leone VA, Dorrestein PC, Knight R, Zarrinpar A. Allaband C, et al. Nat Metab. 2024 Jul;6(7):1282-1293. doi: 10.1038/s42255-024-01064-1. Epub 2024 Jul 1. Nat Metab. 2024. PMID: 38951660 Free PMC article.
Candidate probiotic Lactiplantibacillus plantarum HNU082 rapidly and convergently evolves within human, mice, and zebrafish gut but differentially influences the resident microbiome.
Huang S, Jiang S, Huo D, Allaband C, Estaki M, Cantu V, Belda-Ferre P, Vázquez-Baeza Y, Zhu Q, Ma C, Li C, Zarrinpar A, Liu YY, Knight R, Zhang J. Huang S, et al. Among authors: allaband c. Microbiome. 2021 Jun 30;9(1):151. doi: 10.1186/s40168-021-01102-0. Microbiome. 2021. PMID: 34193290 Free PMC article.
14 results