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Spatially Resolved Top-Down Proteomics of Tissue Sections Based on a Microfluidic Nanodroplet Sample Preparation Platform.
Liao YC, Fulcher JM, Degnan DJ, Williams SM, Bramer LM, Veličković D, Zemaitis KJ, Veličković M, Sontag RL, Moore RJ, Paša-Tolić L, Zhu Y, Zhou M. Liao YC, et al. Among authors: zhu y. Mol Cell Proteomics. 2023 Feb;22(2):100491. doi: 10.1016/j.mcpro.2022.100491. Epub 2023 Jan 2. Mol Cell Proteomics. 2023. PMID: 36603806 Free PMC article.
Proteome Mapping of the Human Pancreatic Islet Microenvironment Reveals Endocrine-Exocrine Signaling Sphere of Influence.
Gosline SJC, Veličković M, Pino JC, Day LZ, Attah IK, Swensen AC, Danna V, Posso C, Rodland KD, Chen J, Matthews CE, Campbell-Thompson M, Laskin J, Burnum-Johnson K, Zhu Y, Piehowski PD. Gosline SJC, et al. Among authors: zhu y. Mol Cell Proteomics. 2023 Aug;22(8):100592. doi: 10.1016/j.mcpro.2023.100592. Epub 2023 Jun 15. Mol Cell Proteomics. 2023. PMID: 37328065 Free PMC article.
Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP).
Jain S, Pei L, Spraggins JM, Angelo M, Carson JP, Gehlenborg N, Ginty F, Gonçalves JP, Hagood JS, Hickey JW, Kelleher NL, Laurent LC, Lin S, Lin Y, Liu H, Naba A, Nakayasu ES, Qian WJ, Radtke A, Robson P, Stockwell BR, Van de Plas R, Vlachos IS, Zhou M; HuBMAP Consortium; Börner K, Snyder MP. Jain S, et al. Nat Cell Biol. 2023 Aug;25(8):1089-1100. doi: 10.1038/s41556-023-01194-w. Epub 2023 Jul 19. Nat Cell Biol. 2023. PMID: 37468756 Free PMC article. Review.
An optimized approach and inflation media for obtaining complimentary mass spectrometry-based omics data from human lung tissue.
Lukowski JK, Olson H, Velickovic M, Wang J, Kyle JE, Kim YM, Williams SM, Zhu Y, Huyck HL, McGraw MD, Poole C, Rogers L, Misra R, Alexandrov T, Ansong C, Pryhuber GS, Clair G, Adkins JN, Carson JP, Anderton CR. Lukowski JK, et al. Among authors: zhu y. Front Mol Biosci. 2022 Nov 16;9:1022775. doi: 10.3389/fmolb.2022.1022775. eCollection 2022. Front Mol Biosci. 2022. PMID: 36465564 Free PMC article.
Author Correction: Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP).
Jain S, Pei L, Spraggins JM, Angelo M, Carson JP, Gehlenborg N, Ginty F, Gonçalves JP, Hagood JS, Hickey JW, Kelleher NL, Laurent LC, Lin S, Lin Y, Liu H, Naba A, Nakayasu ES, Qian WJ, Radtke A, Robson P, Stockwell BR, Van de Plas R, Vlachos IS, Zhou M; HuBMAP Consortium; Börner K, Snyder MP. Jain S, et al. Nat Cell Biol. 2024 May;26(5):839. doi: 10.1038/s41556-024-01384-0. Nat Cell Biol. 2024. PMID: 38429479 No abstract available.
Coupling microdroplet-based sample preparation, multiplexed isobaric labeling, and nanoflow peptide fractionation for deep proteome profiling of tissue microenvironment.
Veličković M, Fillmore TL, Attah K, Posso C, Pino JC, Zhao R, Williams SM, Veličković D, Jacobs JM, Burnum-Johnson KE, Zhu Y, Piehowski PD. Veličković M, et al. Among authors: zhu y. bioRxiv [Preprint]. 2023 Mar 13:2023.03.13.531822. doi: 10.1101/2023.03.13.531822. bioRxiv. 2023. Update in: Anal Chem. 2024 Aug 13;96(32):12973-12982. doi: 10.1021/acs.analchem.4c00523 PMID: 36993277 Free PMC article. Updated. Preprint.
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