Halperin E - Search Results

1

Accurate prediction of disease-risk factors from volumetric medical scans by a deep vision model pre-trained with 2D scans.

Avram O, Durmus B, Rakocz N, Corradetti G, An U, Nittala MG, Terway P, Rudas A, Chen ZJ, Wakatsuki Y, Hirabayashi K, Velaga S, Tiosano L, Corvi F, Verma A, Karamat A, Lindenberg S, Oncel D, Almidani L, Hull V, Fasih-Ahmad S, Esmaeilkhanian H, Cannesson M, Wykoff CC, Rahmani E, Arnold CW, Zhou B, Zaitlen N, Gronau I, Sankararaman S, Chiang JN, Sadda SR, Halperin E. Avram O, et al. Among authors: halperin e. Nat Biomed Eng. 2024 Oct 1. doi: 10.1038/s41551-024-01257-9. Online ahead of print. Nat Biomed Eng. 2024. PMID: 39354052

2

Automated identification of clinical features from sparsely annotated 3-dimensional medical imaging.

Rakocz N, Chiang JN, Nittala MG, Corradetti G, Tiosano L, Velaga S, Thompson M, Hill BL, Sankararaman S, Haines JL, Pericak-Vance MA, Stambolian D, Sadda SR, Halperin E. Rakocz N, et al. Among authors: halperin e. NPJ Digit Med. 2021 Mar 8;4(1):44. doi: 10.1038/s41746-021-00411-w. NPJ Digit Med. 2021. PMID: 33686212 Free PMC article.

3

Automated Identification of Incomplete and Complete Retinal Epithelial Pigment and Outer Retinal Atrophy Using Machine Learning.

Chiang JN, Corradetti G, Nittala MG, Corvi F, Rakocz N, Rudas A, Durmus B, An U, Sankararaman S, Chiu A, Halperin E, Sadda SR. Chiang JN, et al. Among authors: halperin e. Ophthalmol Retina. 2023 Feb;7(2):118-126. doi: 10.1016/j.oret.2022.08.016. Epub 2022 Aug 19. Ophthalmol Retina. 2023. PMID: 35995411

4

CONFINED: distinguishing biological from technical sources of variation by leveraging multiple methylation datasets.

Thompson M, Chen ZJ, Rahmani E, Halperin E. Thompson M, et al. Among authors: halperin e. Genome Biol. 2019 Jul 12;20(1):138. doi: 10.1186/s13059-019-1743-y. Genome Biol. 2019. PMID: 31300005 Free PMC article.

5

Imputation of the continuous arterial line blood pressure waveform from non-invasive measurements using deep learning.

Hill BL, Rakocz N, Rudas Á, Chiang JN, Wang S, Hofer I, Cannesson M, Halperin E. Hill BL, et al. Among authors: halperin e. Sci Rep. 2021 Aug 3;11(1):15755. doi: 10.1038/s41598-021-94913-y. Sci Rep. 2021. PMID: 34344934 Free PMC article.

6

Methylation risk scores are associated with a collection of phenotypes within electronic health record systems.

Thompson M, Hill BL, Rakocz N, Chiang JN, Geschwind D, Sankararaman S, Hofer I, Cannesson M, Zaitlen N, Halperin E. Thompson M, et al. Among authors: halperin e. NPJ Genom Med. 2022 Aug 25;7(1):50. doi: 10.1038/s41525-022-00320-1. NPJ Genom Med. 2022. PMID: 36008412 Free PMC article.

7

Sparse PCA corrects for cell type heterogeneity in epigenome-wide association studies.

Rahmani E, Zaitlen N, Baran Y, Eng C, Hu D, Galanter J, Oh S, Burchard EG, Eskin E, Zou J, Halperin E. Rahmani E, et al. Among authors: halperin e. Nat Methods. 2016 May;13(5):443-5. doi: 10.1038/nmeth.3809. Epub 2016 Mar 28. Nat Methods. 2016. PMID: 27018579 Free PMC article.

8

Correcting for cell-type heterogeneity in DNA methylation: a comprehensive evaluation.

Rahmani E, Zaitlen N, Baran Y, Eng C, Hu D, Galanter J, Oh S, Burchard EG, Eskin E, Zou J, Halperin E. Rahmani E, et al. Among authors: halperin e. Nat Methods. 2017 Feb 28;14(3):218-219. doi: 10.1038/nmeth.4190. Nat Methods. 2017. PMID: 28245214 Free PMC article. No abstract available.

9

STENSL: Microbial Source Tracking with ENvironment SeLection.

An U, Shenhav L, Olson CA, Hsiao EY, Halperin E, Sankararaman S. An U, et al. Among authors: halperin e. mSystems. 2022 Oct 26;7(5):e0099521. doi: 10.1128/msystems.00995-21. Epub 2022 Sep 1. mSystems. 2022. PMID: 36047699 Free PMC article.

10

Genomic privacy and limits of individual detection in a pool.

Sankararaman S, Obozinski G, Jordan MI, Halperin E. Sankararaman S, et al. Among authors: halperin e. Nat Genet. 2009 Sep;41(9):965-7. doi: 10.1038/ng.436. Epub 2009 Aug 23. Nat Genet. 2009. PMID: 19701190

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