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202 results

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Page 1
Reconstructing the sequence specificities of RNA-binding proteins across eukaryotes.
Sasse A, Ray D, Laverty KU, Tam CL, Albu M, Zheng H, Lyudovyk O, Dalal T, Nie K, Magis C, Notredame C, Weirauch MT, Hughes TR, Morris Q. Sasse A, et al. Among authors: morris q. bioRxiv [Preprint]. 2024 Oct 18:2024.10.15.618476. doi: 10.1101/2024.10.15.618476. bioRxiv. 2024. PMID: 39464061 Free PMC article. Preprint.
Uncovering a mammalian neural-specific poly(A) binding protein with unique properties.
Sharma S, Kajjo S, Harra Z, Hasaj B, Delisle V, Ray D, Gutierrez RL, Carrier I, Kleinman C, Morris Q, Hughes TR, McInnes R, Fabian MR. Sharma S, et al. Among authors: morris q. Genes Dev. 2023 Aug 1;37(15-16):760-777. doi: 10.1101/gad.350597.123. Epub 2023 Sep 13. Genes Dev. 2023. PMID: 37704377 Free PMC article.
SON is an essential m6A target for hematopoietic stem cell fate.
Luo H, Cortés-López M, Tam CL, Xiao M, Wakiro I, Chu KL, Pierson A, Chan M, Chang K, Yang X, Fecko D, Han G, Ahn EE, Morris QD, Landau DA, Kharas MG. Luo H, et al. Among authors: morris qd. Cell Stem Cell. 2023 Dec 7;30(12):1658-1673.e10. doi: 10.1016/j.stem.2023.11.006. Cell Stem Cell. 2023. PMID: 38065069 Free PMC article.
At-RS31 orchestrates hierarchical cross-regulation of splicing factors and integrates alternative splicing with TOR-ABA pathways.
Köster T, Venhuizen P, Lewinski M, Petrillo E, Marquez Y, Fuchs A, Ray D, Nimeth BA, Riegler S, Franzmeier S, Zheng H, Hughes T, Morris Q, Barta A, Staiger D, Kalyna M. Köster T, et al. Among authors: morris q. bioRxiv [Preprint]. 2024 Dec 7:2024.12.04.626797. doi: 10.1101/2024.12.04.626797. bioRxiv. 2024. PMID: 39677721 Free PMC article. Preprint.
Extensive binding of uncharacterized human transcription factors to genomic dark matter.
Razavi R, Fathi A, Yellan I, Brechalov A, Laverty KU, Jolma A, Hernandez-Corchado A, Zheng H, Yang AWH, Albu M, Barazandeh M, Hu C, Vorontsov IE, Patel ZM; Codebook Consortium; Kulakovskiy IV, Bucher P, Morris Q, Najafabadi HS, Hughes TR. Razavi R, et al. Among authors: morris q. bioRxiv [Preprint]. 2024 Nov 12:2024.11.11.622123. doi: 10.1101/2024.11.11.622123. bioRxiv. 2024. PMID: 39605320 Free PMC article. Preprint.
Orthrus: Towards Evolutionary and Functional RNA Foundation Models.
Fradkin P, Shi R, Isaev K, Frey BJ, Morris Q, Lee LJ, Wang B. Fradkin P, et al. Among authors: morris q. bioRxiv [Preprint]. 2024 Dec 10:2024.10.10.617658. doi: 10.1101/2024.10.10.617658. bioRxiv. 2024. PMID: 39416135 Free PMC article. Preprint.
Inferring cancer type-specific patterns of metastatic spread.
Koyyalagunta D, Ganesh K, Morris Q. Koyyalagunta D, et al. Among authors: morris q. bioRxiv [Preprint]. 2024 Sep 3:2024.07.09.602790. doi: 10.1101/2024.07.09.602790. bioRxiv. 2024. PMID: 39282311 Free PMC article. Preprint.
Crowd-sourced benchmarking of single-sample tumor subclonal reconstruction.
Salcedo A, Tarabichi M, Buchanan A, Espiritu SMG, Zhang H, Zhu K, Ou Yang TH, Leshchiner I, Anastassiou D, Guan Y, Jang GH, Mootor MFE, Haase K, Deshwar AG, Zou W, Umar I, Dentro S, Wintersinger JA, Chiotti K, Demeulemeester J, Jolly C, Sycza L, Ko M; PCAWG Evolution and Heterogeneity Working Group; SMC-Het Participants; Wedge DC, Morris QD, Ellrott K, Van Loo P, Boutros PC. Salcedo A, et al. Among authors: morris qd. Nat Biotechnol. 2024 Jun 11. doi: 10.1038/s41587-024-02250-y. Online ahead of print. Nat Biotechnol. 2024. PMID: 38862616
Evolution of chromosome-arm aberrations in breast cancer through genetic network rewiring.
Kuzmin E, Baker TM, Lesluyes T, Monlong J, Abe KT, Coelho PP, Schwartz M, Del Corpo J, Zou D, Morin G, Pacis A, Yang Y, Martinez C, Barber J, Kuasne H, Li R, Bourgey M, Fortier AM, Davison PG, Omeroglu A, Guiot MC, Morris Q, Kleinman CL, Huang S, Gingras AC, Ragoussis J, Bourque G, Van Loo P, Park M. Kuzmin E, et al. Among authors: morris q. Cell Rep. 2024 Apr 23;43(4):113988. doi: 10.1016/j.celrep.2024.113988. Epub 2024 Mar 22. Cell Rep. 2024. PMID: 38517886 Free PMC article.
202 results