Zhong Z - Search Results

1

Biosynthetic enzyme analysis identifies a protective role for TLR4-acting gut microbial sulfonolipids in inflammatory bowel disease.

Older EA, Zhang J, Ferris ZE, Xue D, Zhong Z, Mitchell MK, Madden M, Wang Y, Chen H, Nagarkatti P, Nagarkatti M, Fan D, Ellermann M, Li YX, Li J. Older EA, et al. Among authors: zhong z. Nat Commun. 2024 Oct 30;15(1):9371. doi: 10.1038/s41467-024-53670-y. Nat Commun. 2024. PMID: 39477928 Free PMC article.

2

Correlational networking guides the discovery of unclustered lanthipeptide protease-encoding genes.

Xue D, Older EA, Zhong Z, Shang Z, Chen N, Dittenhauser N, Hou L, Cai P, Walla MD, Dong SH, Tang X, Chen H, Nagarkatti P, Nagarkatti M, Li YX, Li J. Xue D, et al. Among authors: zhong z. Nat Commun. 2022 Mar 28;13(1):1647. doi: 10.1038/s41467-022-29325-1. Nat Commun. 2022. PMID: 35347143 Free PMC article.

3

Discovery of cationic nonribosomal peptides as Gram-negative antibiotics through global genome mining.

Li YX, Zhong Z, Zhang WP, Qian PY. Li YX, et al. Among authors: zhong z. Nat Commun. 2018 Aug 16;9(1):3273. doi: 10.1038/s41467-018-05781-6. Nat Commun. 2018. PMID: 30115920 Free PMC article.

4

Refactoring and Heterologous Expression of Class III Lanthipeptide Biosynthetic Gene Clusters Lead to the Discovery of N,N-Dimethylated Lantibiotics from Firmicutes.

Xue D, Shang Z, Older EA, Zhong Z, Pulliam C, Peter K, Nagarkatti M, Nagarkatti P, Li YX, Li J. Xue D, et al. Among authors: zhong z. ACS Chem Biol. 2023 Mar 17;18(3):508-517. doi: 10.1021/acschembio.2c00849. Epub 2023 Mar 9. ACS Chem Biol. 2023. PMID: 36926816 Free PMC article.

5

Biosynthetic Enzyme-guided Disease Correlation Connects Gut Microbial Metabolites Sulfonolipids to Inflammatory Bowel Disease Involving TLR4 Signaling.

Older EA, Zhang J, Ferris ZE, Xue D, Zhong Z, Mitchell MK, Madden M, Wang Y, Chen H, Nagarkatti P, Nagarkatti M, Fan D, Ellermann M, Li YX, Li J. Older EA, et al. Among authors: zhong z. bioRxiv [Preprint]. 2023 May 2:2023.03.16.533047. doi: 10.1101/2023.03.16.533047. bioRxiv. 2023. Update in: Nat Commun. 2024 Oct 30;15(1):9371. doi: 10.1038/s41467-024-53670-y PMID: 36993324 Free PMC article. Updated. Preprint.

6

Challenges and advances in genome mining of ribosomally synthesized and post-translationally modified peptides (RiPPs).

Zhong Z, He B, Li J, Li YX. Zhong Z, et al. Synth Syst Biotechnol. 2020 Jun 24;5(3):155-172. doi: 10.1016/j.synbio.2020.06.002. eCollection 2020 Sep. Synth Syst Biotechnol. 2020. PMID: 32637669 Free PMC article. Review.

7

Genomic and metabolic analyses reveal antagonistic lanthipeptides in archaea.

Liang H, Song ZM, Zhong Z, Zhang D, Yang W, Zhou L, Older EA, Li J, Wang H, Zeng Z, Li YX. Liang H, et al. Among authors: zhong z. Microbiome. 2023 Apr 14;11(1):74. doi: 10.1186/s40168-023-01521-1. Microbiome. 2023. PMID: 37060102 Free PMC article.

8

Exploring the roles of ribosomal peptides in prokaryote-phage interactions through deep learning-enabled metagenome mining.

Gao Y, Zhong Z, Zhang D, Zhang J, Li YX. Gao Y, et al. Among authors: zhong z. Microbiome. 2024 May 24;12(1):94. doi: 10.1186/s40168-024-01807-y. Microbiome. 2024. PMID: 38790030 Free PMC article.

9

Rule-based omics mining reveals antimicrobial macrocyclic peptides against drug-resistant clinical isolates.

Cheng Z, He BB, Lei K, Gao Y, Shi Y, Zhong Z, Liu H, Liu R, Zhang H, Wu S, Zhang W, Tang X, Li YX. Cheng Z, et al. Among authors: zhong z. Nat Commun. 2024 Jun 8;15(1):4901. doi: 10.1038/s41467-024-49215-y. Nat Commun. 2024. PMID: 38851779 Free PMC article.

10

A systematically biosynthetic investigation of lactic acid bacteria reveals diverse antagonistic bacteriocins that potentially shape the human microbiome.

Zhang D, Zhang J, Kalimuthu S, Liu J, Song ZM, He BB, Cai P, Zhong Z, Feng C, Neelakantan P, Li YX. Zhang D, et al. Among authors: zhong z. Microbiome. 2023 Apr 27;11(1):91. doi: 10.1186/s40168-023-01540-y. Microbiome. 2023. PMID: 37101246 Free PMC article.

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