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Incomplete human reference genomes can drive false sex biases and expose patient-identifying information in metagenomic data.
Knight R, Guccione C, Patel L, Tomofuji Y, McDonald D, Gonzalez A, Sepich-Poore G, Sonehara K, Zakeri M, Chen Y, Dilmore A, Damle N, Baranzini S, Nakatsuji T, Gallo R, Langmead B, Okada Y, Curtius K. Knight R, et al. Among authors: sonehara k. Res Sq [Preprint]. 2024 Oct 23:rs.3.rs-4721159. doi: 10.21203/rs.3.rs-4721159/v1. Res Sq. 2024. PMID: 39502785 Free PMC article. Preprint.
Inconsistent embryo selection across polygenic score methods.
Namba S, Akiyama M, Hamanoue H, Kato K, Kawashima M, Kushima I, Matsuda K, Nakatochi M, Ogishima S, Sonehara K, Suzuki K, Takata A, Tamiya G, Tanikawa C, Yamamoto K, Yamamoto N; BioBank Japan Project; Ozaki N, Okada Y. Namba S, et al. Among authors: sonehara k. Nat Hum Behav. 2024 Oct 14. doi: 10.1038/s41562-024-02019-y. Online ahead of print. Nat Hum Behav. 2024. PMID: 39402258 No abstract available.
Publisher Correction: Statistically and functionally fine-mapped blood eQTLs and pQTLs from 1,405 humans reveal distinct regulation patterns and disease relevance.
Wang QS, Hasegawa T, Namkoong H, Saiki R, Edahiro R, Sonehara K, Tanaka H, Azekawa S, Chubachi S, Takahashi Y, Sakaue S, Namba S, Yamamoto K, Shiraishi Y, Chiba K, Tanaka H, Makishima H, Nannya Y, Zhang Z, Tsujikawa R, Koike R, Takano T, Ishii M, Kimura A, Inoue F, Kanai T, Fukunaga K, Ogawa S, Imoto S, Miyano S, Okada Y; Japan COVID-19 Task Force. Wang QS, et al. Among authors: sonehara k. Nat Genet. 2024 Oct;56(10):2281. doi: 10.1038/s41588-024-01959-5. Nat Genet. 2024. PMID: 39333769 Free PMC article. No abstract available.
Statistically and functionally fine-mapped blood eQTLs and pQTLs from 1,405 humans reveal distinct regulation patterns and disease relevance.
Wang QS, Hasegawa T, Namkoong H, Saiki R, Edahiro R, Sonehara K, Tanaka H, Azekawa S, Chubachi S, Takahashi Y, Sakaue S, Namba S, Yamamoto K, Shiraishi Y, Chiba K, Tanaka H, Makishima H, Nannya Y, Zhang Z, Tsujikawa R, Koike R, Takano T, Ishii M, Kimura A, Inoue F, Kanai T, Fukunaga K, Ogawa S, Imoto S, Miyano S, Okada Y; Japan COVID-19 Task Force. Wang QS, et al. Among authors: sonehara k. Nat Genet. 2024 Oct;56(10):2054-2067. doi: 10.1038/s41588-024-01896-3. Epub 2024 Sep 24. Nat Genet. 2024. PMID: 39317738 Free PMC article.
Primary Aldosteronism and Risk of Cardiovascular Outcomes: Genome-Wide Association and Mendelian Randomization Study.
Inoue K, Naito T, Fuji R, Sonehara K, Yamamoto K, Baba R, Kodama T, Otagaki Y, Okada A, Itcho K, Kobuke K, Ohno H; BioBank Japan; Morisaki T, Hattori N, Goto A, Nishikawa T, Oki K, Okada Y. Inoue K, et al. Among authors: sonehara k. J Am Heart Assoc. 2024 Aug 6;13(15):e034180. doi: 10.1161/JAHA.123.034180. Epub 2024 Aug 5. J Am Heart Assoc. 2024. PMID: 39101507 Free article.
Evaluation of the association between predictive factors and the development of immune-related adverse events and prognostic factors for chemoimmunotherapy in patients with non-small cell lung cancer: A multicenter retrospective study.
Ozawa R, Sonehara K, Hachiya T, Nozawa S, Agatsuma T, Yamamoto H, Kato A, Matsuo A, Hirabayashi T, Araki T, Komatsu M, Tateishi K, Hanaoka M. Ozawa R, et al. Among authors: sonehara k. Cancer Med. 2024 Aug;13(15):e70080. doi: 10.1002/cam4.70080. Cancer Med. 2024. PMID: 39096117 Free PMC article.
Evaluation of radiofrequency identification tag accuracy using bronchoscopy with fluoroscopy and virtual navigation guidance before segmentectomy.
Komatsu M, Miura K, Yamanaka M, Suzuki Y, Araki T, Goto N, Akahane J, Sonehara K, Matsuoka S, Eguchi T, Hamanaka K, Shimizu K, Yasuo M, Hanaoka M. Komatsu M, et al. Among authors: sonehara k. Surg Endosc. 2024 Sep;38(9):5438-5445. doi: 10.1007/s00464-024-11110-4. Epub 2024 Aug 1. Surg Endosc. 2024. PMID: 39090201 Free PMC article.
Quantification of escape from X chromosome inactivation with single-cell omics data reveals heterogeneity across cell types and tissues.
Tomofuji Y, Edahiro R, Sonehara K, Shirai Y, Kock KH, Wang QS, Namba S, Moody J, Ando Y, Suzuki A, Yata T, Ogawa K, Naito T, Namkoong H, Xuan Lin QX, Buyamin EV, Tan LM, Sonthalia R, Han KY, Tanaka H, Lee H; Asian Immune Diversity Atlas (AIDA) Network; Japan COVID-19 Task Force; Biobank Japan Project; Okuno T, Liu B, Matsuda K, Fukunaga K, Mochizuki H, Park WY, Yamamoto K, Hon CC, Shin JW, Prabhakar S, Kumanogoh A, Okada Y. Tomofuji Y, et al. Among authors: sonehara k. Cell Genom. 2024 Aug 14;4(8):100625. doi: 10.1016/j.xgen.2024.100625. Epub 2024 Jul 30. Cell Genom. 2024. PMID: 39084228 Free PMC article.
87 results