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NCBI RefSeq: reference sequence standards through 25 years of curation and annotation.
Goldfarb T, Kodali VK, Pujar S, Brover V, Robbertse B, Farrell CM, Oh DH, Astashyn A, Ermolaeva O, Haddad D, Hlavina W, Hoffman J, Jackson JD, Joardar VS, Kristensen D, Masterson P, McGarvey KM, McVeigh R, Mozes E, Murphy MR, Schafer SS, Souvorov A, Spurrier B, Strope PK, Sun H, Vatsan AR, Wallin C, Webb D, Brister JR, Hatcher E, Kimchi A, Klimke W, Marchler-Bauer A, Pruitt KD, Thibaud-Nissen F, Murphy TD. Goldfarb T, et al. Among authors: murphy mr. Nucleic Acids Res. 2025 Jan 6;53(D1):D243-D257. doi: 10.1093/nar/gkae1038. Nucleic Acids Res. 2025. PMID: 39526381 Free PMC article.
Nucleosome positioning and transcription.
Simpson RT, Roth SY, Morse RH, Patterton HG, Cooper JP, Murphy M, Kladde MP, Shimizu M. Simpson RT, et al. Cold Spring Harb Symp Quant Biol. 1993;58:237-45. doi: 10.1101/sqb.1993.058.01.028. Cold Spring Harb Symp Quant Biol. 1993. PMID: 7956034 No abstract available.
Noncoding translation mitigation.
Kesner JS, Chen Z, Shi P, Aparicio AO, Murphy MR, Guo Y, Trehan A, Lipponen JE, Recinos Y, Myeku N, Wu X. Kesner JS, et al. Among authors: murphy mr. Nature. 2023 May;617(7960):395-402. doi: 10.1038/s41586-023-05946-4. Epub 2023 Apr 12. Nature. 2023. PMID: 37046090 Free PMC article.
Collateral activity of the CRISPR/RfxCas13d system in human cells.
Shi P, Murphy MR, Aparicio AO, Kesner JS, Fang Z, Chen Z, Trehan A, Guo Y, Wu X. Shi P, et al. Among authors: murphy mr. Commun Biol. 2023 Mar 28;6(1):334. doi: 10.1038/s42003-023-04708-2. Commun Biol. 2023. PMID: 36977923 Free PMC article.
Long Non-Coding RNA Generated from CDKN1A Gene by Alternative Polyadenylation Regulates p21 Expression during DNA Damage Response.
Murphy MR, Ramadei A, Doymaz A, Varriano S, Natelson D, Yu A, Aktas S, Mazzeo M, Mazzeo M, Zakusilo G, Kleiman FE. Murphy MR, et al. bioRxiv [Preprint]. 2023 Jan 10:2023.01.10.523318. doi: 10.1101/2023.01.10.523318. bioRxiv. 2023. Update in: Nucleic Acids Res. 2023 Nov 27;51(21):11911-11926. doi: 10.1093/nar/gkad899 PMID: 36711808 Free PMC article. Updated. Preprint.
178 results