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Single-cell DNA methylome and 3D genome atlas of the human subcutaneous adipose tissue.
Chen ZJ, Das SS, Kar A, Lee SHT, Abuhanna KD, Alvarez M, Sukhatme MG, Gelev KZ, Heffel MG, Zhang Y, Avram O, Rahmani E, Sankararaman S, Heinonen S, Peltoniemi H, Halperin E, Pietiläinen KH, Luo C, Pajukanta P. Chen ZJ, et al. bioRxiv [Preprint]. 2024 Nov 3:2024.11.02.621694. doi: 10.1101/2024.11.02.621694. bioRxiv. 2024. PMID: 39554055 Free PMC article. Preprint.
Accurate prediction of disease-risk factors from volumetric medical scans by a deep vision model pre-trained with 2D scans.
Avram O, Durmus B, Rakocz N, Corradetti G, An U, Nittala MG, Terway P, Rudas A, Chen ZJ, Wakatsuki Y, Hirabayashi K, Velaga S, Tiosano L, Corvi F, Verma A, Karamat A, Lindenberg S, Oncel D, Almidani L, Hull V, Fasih-Ahmad S, Esmaeilkhanian H, Cannesson M, Wykoff CC, Rahmani E, Arnold CW, Zhou B, Zaitlen N, Gronau I, Sankararaman S, Chiang JN, Sadda SR, Halperin E. Avram O, et al. Among authors: chen zj. Nat Biomed Eng. 2024 Oct 1. doi: 10.1038/s41551-024-01257-9. Online ahead of print. Nat Biomed Eng. 2024. PMID: 39354052
Epigenetic patient stratification via contrastive machine learning refines hallmark biomarkers in minoritized children with asthma.
Gorla A, Witonsky J, Elhawary JR, Chen ZJ, Mefford J, Perez-Garcia J, Huntsman S, Hu D, Eng C, Woodruff PG, Sankararaman S, Ziv E, Flint J, Zaitlen N, Burchard E, Rahmani E. Gorla A, et al. Among authors: chen zj. Res Sq [Preprint]. 2024 Sep 13:rs.3.rs-5066762. doi: 10.21203/rs.3.rs-5066762/v1. Res Sq. 2024. PMID: 39315258 Free PMC article. Preprint.
A machine learning algorithm to increase COVID-19 inpatient diagnostic capacity.
Goodman-Meza D, Rudas A, Chiang JN, Adamson PC, Ebinger J, Sun N, Botting P, Fulcher JA, Saab FG, Brook R, Eskin E, An U, Kordi M, Jew B, Balliu B, Chen Z, Hill BL, Rahmani E, Halperin E, Manuel V. Goodman-Meza D, et al. PLoS One. 2020 Sep 22;15(9):e0239474. doi: 10.1371/journal.pone.0239474. eCollection 2020. PLoS One. 2020. PMID: 32960917 Free PMC article.
Crowd-sourced machine learning prediction of long COVID using data from the National COVID Cohort Collaborative.
Bergquist T, Loomba J, Pfaff E, Xia F, Zhao Z, Zhu Y, Mitchell E, Bhattacharya B, Shetty G, Munia T, Delong G, Tariq A, Butzin-Dozier Z, Ji Y, Li H, Coyle J, Shi S, Philips RV, Mertens A, Pirracchio R, van der Laan M, Colford JM Jr, Hubbard A, Gao J, Chen G, Velingker N, Li Z, Wu Y, Stein A, Huang J, Dai Z, Long Q, Naik M, Holmes J, Mowery D, Wong E, Parekh R, Getzen E, Hightower J, Blase J; Long COVID Computational Challenge Participants; N3C Consortium. Bergquist T, et al. EBioMedicine. 2024 Oct;108:105333. doi: 10.1016/j.ebiom.2024.105333. Epub 2024 Sep 24. EBioMedicine. 2024. PMID: 39321500 Free PMC article.
1,993 results