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Page 1
Global Genotype by Environment Prediction Competition Reveals That Diverse Modeling Strategies Can Deliver Satisfactory Maize Yield Estimates.
Washburn JD, Varela JI, Xavier A, Chen Q, Ertl D, Gage JL, Holland JB, Lima DC, Romay MC, Lopez-Cruz M, de Los Campos G, Barber W, Zimmer C, Trucillo Silva I, Rocha F, Rincent R, Ali B, Hu H, Runcie DE, Gusev K, Slabodkin A, Bax P, Aubert J, Gangloff H, Mary-Huard T, Vanrenterghem T, Quesada-Traver C, Yates S, Ariza-Suárez D, Ulrich A, Wyler M, Kick DR, Bellis ES, Causey JL, Soriano Chavez E, Wang Y, Piyush V, Fernando GD, Hu RK, Kumar R, Timon AJ, Venkatesh R, Segura Abá K, Chen H, Ranaweera T, Shiu SH, Wang P, Gordon MJ, Amos BK, Busato S, Perondi D, Gogna A, Psaroudakis D, Chen CPJ, Al-Mamun HA, Danilevicz MF, Upadhyaya SR, Edwards D, de Leon N. Washburn JD, et al. Among authors: holland jb. Genetics. 2024 Nov 22:iyae195. doi: 10.1093/genetics/iyae195. Online ahead of print. Genetics. 2024. PMID: 39576009
Global Genotype by Environment Prediction Competition Reveals That Diverse Modeling Strategies Can Deliver Satisfactory Maize Yield Estimates.
Washburn JD, Varela JI, Xavier A, Chen Q, Ertl D, Gage JL, Holland JB, Lima DC, Romay MC, Lopez-Cruz M, de Los Campos G, Barber W, Zimmer C, Silva IT, Rocha F, Rincent R, Ali B, Hu H, Runcie DE, Gusev K, Slabodkin A, Bax P, Aubert J, Gangloff H, Mary-Huard T, Vanrenterghem T, Quesada-Traver C, Yates S, Ariza-Suárez D, Ulrich A, Wyler M, Kick DR, Bellis ES, Causey JL, Chavez ES, Wang Y, Piyush V, Fernando GD, Hu RK, Kumar R, Timon AJ, Venkatesh R, Abá KS, Chen H, Ranaweera T, Shiu SH, Wang P, Gordon MJ, Amos BK, Busato S, Perondi D, Gogna A, Psaroudakis D, Chen CPJ, Al-Mamun HA, Danilevicz MF, Upadhyaya SR, Edwards D, de Leon N. Washburn JD, et al. Among authors: holland jb. bioRxiv [Preprint]. 2024 Sep 19:2024.09.13.612969. doi: 10.1101/2024.09.13.612969. bioRxiv. 2024. Update in: Genetics. 2024 Nov 22:iyae195. doi: 10.1093/genetics/iyae195 PMID: 39345633 Free PMC article. Updated. Preprint.
Genomes to Fields 2022 Maize genotype by Environment Prediction Competition.
Lima DC, Washburn JD, Varela JI, Chen Q, Gage JL, Romay MC, Holland J, Ertl D, Lopez-Cruz M, Aguate FM, de Los Campos G, Kaeppler S, Beissinger T, Bohn M, Buckler E, Edwards J, Flint-Garcia S, Gore MA, Hirsch CN, Knoll JE, McKay J, Minyo R, Murray SC, Ortez OA, Schnable JC, Sekhon RS, Singh MP, Sparks EE, Thompson A, Tuinstra M, Wallace J, Weldekidan T, Xu W, de Leon N. Lima DC, et al. BMC Res Notes. 2023 Jul 17;16(1):148. doi: 10.1186/s13104-023-06421-z. BMC Res Notes. 2023. PMID: 37461058 Free PMC article.
The genetic architecture of maize height.
Peiffer JA, Romay MC, Gore MA, Flint-Garcia SA, Zhang Z, Millard MJ, Gardner CA, McMullen MD, Holland JB, Bradbury PJ, Buckler ES. Peiffer JA, et al. Among authors: holland jb. Genetics. 2014 Apr;196(4):1337-56. doi: 10.1534/genetics.113.159152. Epub 2014 Feb 10. Genetics. 2014. PMID: 24514905 Free PMC article.
The Genomic Basis for Short-Term Evolution of Environmental Adaptation in Maize.
Wisser RJ, Fang Z, Holland JB, Teixeira JEC, Dougherty J, Weldekidan T, de Leon N, Flint-Garcia S, Lauter N, Murray SC, Xu W, Hallauer A. Wisser RJ, et al. Among authors: holland jb. Genetics. 2019 Dec;213(4):1479-1494. doi: 10.1534/genetics.119.302780. Epub 2019 Oct 15. Genetics. 2019. PMID: 31615843 Free PMC article.
Dominance Effects and Functional Enrichments Improve Prediction of Agronomic Traits in Hybrid Maize.
Ramstein GP, Larsson SJ, Cook JP, Edwards JW, Ersoz ES, Flint-Garcia S, Gardner CA, Holland JB, Lorenz AJ, McMullen MD, Millard MJ, Rocheford TR, Tuinstra MR, Bradbury PJ, Buckler ES, Romay MC. Ramstein GP, et al. Among authors: holland jb. Genetics. 2020 May;215(1):215-230. doi: 10.1534/genetics.120.303025. Epub 2020 Mar 9. Genetics. 2020. PMID: 32152047 Free PMC article.
Utility of Climatic Information via Combining Ability Models to Improve Genomic Prediction for Yield Within the Genomes to Fields Maize Project.
Jarquin D, de Leon N, Romay C, Bohn M, Buckler ES, Ciampitti I, Edwards J, Ertl D, Flint-Garcia S, Gore MA, Graham C, Hirsch CN, Holland JB, Hooker D, Kaeppler SM, Knoll J, Lee EC, Lawrence-Dill CJ, Lynch JP, Moose SP, Murray SC, Nelson R, Rocheford T, Schnable JC, Schnable PS, Smith M, Springer N, Thomison P, Tuinstra M, Wisser RJ, Xu W, Yu J, Lorenz A. Jarquin D, et al. Among authors: holland jb. Front Genet. 2021 Mar 8;11:592769. doi: 10.3389/fgene.2020.592769. eCollection 2020. Front Genet. 2021. PMID: 33763106 Free PMC article.
2020-2021 field seasons of Maize GxE project within the Genomes to Fields Initiative.
Lima DC, Aviles AC, Alpers RT, Perkins A, Schoemaker DL, Costa M, Michel KJ, Kaeppler S, Ertl D, Romay MC, Gage JL, Holland J, Beissinger T, Bohn M, Buckler E, Edwards J, Flint-Garcia S, Gore MA, Hirsch CN, Knoll JE, McKay J, Minyo R, Murray SC, Schnable J, Sekhon RS, Singh MP, Sparks EE, Thomison P, Thompson A, Tuinstra M, Wallace J, Washburn JD, Weldekidan T, Xu W, de Leon N. Lima DC, et al. BMC Res Notes. 2023 Sep 14;16(1):219. doi: 10.1186/s13104-023-06430-y. BMC Res Notes. 2023. PMID: 37710302 Free PMC article.
2018-2019 field seasons of the Maize Genomes to Fields (G2F) G x E project.
Lima DC, Aviles AC, Alpers RT, McFarland BA, Kaeppler S, Ertl D, Romay MC, Gage JL, Holland J, Beissinger T, Bohn M, Buckler E, Edwards J, Flint-Garcia S, Hirsch CN, Hood E, Hooker DC, Knoll JE, Kolkman JM, Liu S, McKay J, Minyo R, Moreta DE, Murray SC, Nelson R, Schnable JC, Sekhon RS, Singh MP, Thomison P, Thompson A, Tuinstra M, Wallace J, Washburn JD, Weldekidan T, Wisser RJ, Xu W, de Leon N. Lima DC, et al. BMC Genom Data. 2023 May 25;24(1):29. doi: 10.1186/s12863-023-01129-2. BMC Genom Data. 2023. PMID: 37231352 Free PMC article.
112 results