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phyBWT2: phylogeny reconstruction via eBWT positional clustering.
Guerrini V, Conte A, Grossi R, Liti G, Rosone G, Tattini L. Guerrini V, et al. Among authors: liti g. Algorithms Mol Biol. 2023 Aug 3;18(1):11. doi: 10.1186/s13015-023-00232-4. Algorithms Mol Biol. 2023. PMID: 37537624 Free PMC article.
Building pangenome graphs.
Garrison E, Guarracino A, Heumos S, Villani F, Bao Z, Tattini L, Hagmann J, Vorbrugg S, Marco-Sola S, Kubica C, Ashbrook DG, Thorell K, Rusholme-Pilcher RL, Liti G, Rudbeck E, Golicz AA, Nahnsen S, Yang Z, Mwaniki MN, Nobrega FL, Wu Y, Chen H, de Ligt J, Sudmant PH, Huang S, Weigel D, Soranzo N, Colonna V, Williams RW, Prins P. Garrison E, et al. Among authors: liti g. Nat Methods. 2024 Nov;21(11):2008-2012. doi: 10.1038/s41592-024-02430-3. Epub 2024 Oct 21. Nat Methods. 2024. PMID: 39433878
An integrative taxonomy approach reveals Saccharomyces chiloensis sp. nov. as a newly discovered species from Coastal Patagonia.
Peña TA, Villarreal P, Agier N, De Chiara M, Barría T, Urbina K, Villarroel CA, Santos ARO, Rosa CA, Nespolo RF, Liti G, Fischer G, Cubillos FA. Peña TA, et al. Among authors: liti g. PLoS Genet. 2024 Sep 6;20(9):e1011396. doi: 10.1371/journal.pgen.1011396. eCollection 2024 Sep. PLoS Genet. 2024. PMID: 39241096 Free PMC article.
Natural proteome diversity links aneuploidy tolerance to protein turnover.
Muenzner J, Trébulle P, Agostini F, Zauber H, Messner CB, Steger M, Kilian C, Lau K, Barthel N, Lehmann A, Textoris-Taube K, Caudal E, Egger AS, Amari F, De Chiara M, Demichev V, Gossmann TI, Mülleder M, Liti G, Schacherer J, Selbach M, Berman J, Ralser M. Muenzner J, et al. Among authors: liti g. Nature. 2024 Jun;630(8015):149-157. doi: 10.1038/s41586-024-07442-9. Epub 2024 May 22. Nature. 2024. PMID: 38778096 Free PMC article.
Ancient and recent origins of shared polymorphisms in yeast.
Tellini N, De Chiara M, Mozzachiodi S, Tattini L, Vischioni C, Naumova ES, Warringer J, Bergström A, Liti G. Tellini N, et al. Among authors: liti g. Nat Ecol Evol. 2024 Apr;8(4):761-776. doi: 10.1038/s41559-024-02352-5. Epub 2024 Mar 12. Nat Ecol Evol. 2024. PMID: 38472432
Engineering heterothallic strains in fission yeast.
García-Ruano D, Hsu I, Leray B, Billard B, Liti G, Coudreuse D. García-Ruano D, et al. Among authors: liti g. Yeast. 2024 Mar;41(3):87-94. doi: 10.1002/yea.3914. Epub 2023 Dec 15. Yeast. 2024. PMID: 38099423
116 results