Barrick D - Search Results

1

Reliable amplification of highly repetitive or low complexity sequence DNA enabled by superhelicase-mediated isothermal amplification.

Kang J, Rashid F, Murray PJ, Merino-Urteaga R, Gavrilov M, Shang T, Jo W, Ahmed A, Aksel T, Barrick D, Berger JM, Ha T. Kang J, et al. Among authors: barrick d. bioRxiv [Preprint]. 2024 Nov 29:2024.11.27.625726. doi: 10.1101/2024.11.27.625726. bioRxiv. 2024. PMID: 39651128 Free PMC article. Preprint.

2

One RING to rule them all: Mind bomb-1 ccRING3 controls Notch signaling.

Ramsey KM, Barrick D. Ramsey KM, et al. Among authors: barrick d. Structure. 2024 Oct 3;32(10):1550-1551. doi: 10.1016/j.str.2024.09.009. Structure. 2024. PMID: 39366337

3

The importance of input sequence set to consensus-derived proteins and their relationship to reconstructed ancestral proteins.

Nixon C, Lim SA, Sternke M, Barrick D, Harms MJ, Marqusee S. Nixon C, et al. Among authors: barrick d. Protein Sci. 2024 Jun;33(6):e5011. doi: 10.1002/pro.5011. Protein Sci. 2024. PMID: 38747388

4

Unraveling paralog-specific Notch signaling through thermodynamics of ternary complex formation and transcriptional activation of chimeric receptors.

Ramsey KM, Barrick D. Ramsey KM, et al. Among authors: barrick d. Protein Sci. 2024 Apr;33(4):e4947. doi: 10.1002/pro.4947. Protein Sci. 2024. PMID: 38511488

5

The importance of input sequence set to consensus-derived proteins and their relationship to reconstructed ancestral proteins.

Nixon C, Lim SA, Sternke M, Barrick D, Harms M, Marqusee S. Nixon C, et al. Among authors: barrick d. bioRxiv [Preprint]. 2023 Jul 1:2023.06.29.547063. doi: 10.1101/2023.06.29.547063. bioRxiv. 2023. Update in: Protein Sci. 2024 Jun;33(6):e5011. doi: 10.1002/pro.5011 PMID: 37425932 Free PMC article. Updated. Preprint.

6

Stability Islands and the Folding Cooperativity of a Seven-Repeat Array from Topoisomerase V.

Petersen M, Fang R, Majumdar A, Barrick D. Petersen M, et al. Among authors: barrick d. J Am Chem Soc. 2023 Jun 14;145(23):12641-12650. doi: 10.1021/jacs.3c02193. Epub 2023 Jun 1. J Am Chem Soc. 2023. PMID: 37262333 Free PMC article.

7

Structural features of the Notch ankyrin domain-Deltex WWE₂ domain heterodimer determined by NMR spectroscopy and functional implications.

Carter AA, Ramsey KM, Hatem CL, Sherry KP, Majumdar A, Barrick D. Carter AA, et al. Among authors: barrick d. Structure. 2023 May 4;31(5):584-594.e5. doi: 10.1016/j.str.2023.03.003. Epub 2023 Mar 27. Structure. 2023. PMID: 36977409 Free PMC article.

8

Singular value decomposition of protein sequences as a method to visualize sequence and residue space.

Baxter-Koenigs AR, El Nesr G, Barrick D. Baxter-Koenigs AR, et al. Among authors: barrick d. Protein Sci. 2022 Oct;31(10):e4422. doi: 10.1002/pro.4422. Protein Sci. 2022. PMID: 36173173 Free PMC article.

9

Surface residues and nonadditive interactions stabilize a consensus homeodomain protein.

Sternke M, Tripp KW, Barrick D. Sternke M, et al. Among authors: barrick d. Biophys J. 2021 Dec 7;120(23):5267-5278. doi: 10.1016/j.bpj.2021.10.035. Epub 2021 Oct 30. Biophys J. 2021. PMID: 34757081 Free PMC article.

10

Analysis of Tandem Repeat Protein Folding Using Nearest-Neighbor Models.

Petersen M, Barrick D. Petersen M, et al. Among authors: barrick d. Annu Rev Biophys. 2021 May 6;50:245-265. doi: 10.1146/annurev-biophys-102220-083020. Epub 2021 Feb 19. Annu Rev Biophys. 2021. PMID: 33606943 Free PMC article. Review.

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