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Page 1
Structure-based drug design with equivariant diffusion models.
Schneuing A, Harris C, Du Y, Didi K, Jamasb A, Igashov I, Du W, Gomes C, Blundell TL, Lio P, Welling M, Bronstein M, Correia B. Schneuing A, et al. Among authors: didi k. Nat Comput Sci. 2024 Dec;4(12):899-909. doi: 10.1038/s43588-024-00737-x. Epub 2024 Dec 9. Nat Comput Sci. 2024. PMID: 39653846 Free PMC article.
Synsor: a tool for alignment-free detection of engineered DNA sequences.
Tay AP, Didi K, Wickramarachchi A, Bauer DC, Wilson LOW, Maselko M. Tay AP, et al. Among authors: didi k. Front Bioeng Biotechnol. 2024 Jul 12;12:1375626. doi: 10.3389/fbioe.2024.1375626. eCollection 2024. Front Bioeng Biotechnol. 2024. PMID: 39070163 Free PMC article.
Evaluating Representation Learning on the Protein Structure Universe.
Jamasb AR, Morehead A, Joshi CK, Zhang Z, Didi K, Mathis S, Harris C, Tang J, Cheng J, Liò P, Blundell TL. Jamasb AR, et al. Among authors: didi k. ArXiv [Preprint]. 2024 Jun 19:arXiv:2406.13864v1. ArXiv. 2024. PMID: 38947934 Free PMC article. Preprint.
RNA-FrameFlow: Flow Matching for de novo 3D RNA Backbone Design.
Anand R, Joshi CK, Morehead A, Jamasb AR, Harris C, Mathis SV, Didi K, Hooi B, Liò P. Anand R, et al. Among authors: didi k. ArXiv [Preprint]. 2024 Jun 19:arXiv:2406.13839v1. ArXiv. 2024. PMID: 38947930 Free PMC article. Preprint.
Biomolecular condensate phase diagrams with a combinatorial microdroplet platform.
Arter WE, Qi R, Erkamp NA, Krainer G, Didi K, Welsh TJ, Acker J, Nixon-Abell J, Qamar S, Guillén-Boixet J, Franzmann TM, Kuster D, Hyman AA, Borodavka A, George-Hyslop PS, Alberti S, Knowles TPJ. Arter WE, et al. Among authors: didi k. Nat Commun. 2022 Dec 21;13(1):7845. doi: 10.1038/s41467-022-35265-7. Nat Commun. 2022. PMID: 36543777 Free PMC article.