Aoki-Kinoshita KF - Search Results

1

Updates implemented in version 4 of the GlyCosmos Glycoscience Portal.

Lee S, Ono T, Masaaki S, Fujita A, Matsubara M, Zappa A, Yamada I, Aoki-Kinoshita KF. Lee S, et al. Among authors: aoki kinoshita kf. Anal Bioanal Chem. 2024 Dec 17. doi: 10.1007/s00216-024-05692-0. Online ahead of print. Anal Bioanal Chem. 2024. PMID: 39690313

2

Toward integration of glycan chemical databases: an algorithm and software tool for extracting sugars from chemical structures.

Matsubara M, Bolton EE, Aoki-Kinoshita KF, Yamada I. Matsubara M, et al. Among authors: aoki kinoshita kf. Anal Bioanal Chem. 2024 Aug 30. doi: 10.1007/s00216-024-05508-1. Online ahead of print. Anal Bioanal Chem. 2024. PMID: 39212696

3

The GlyCosmos Portal: a unified and comprehensive web resource for the glycosciences.

Yamada I, Shiota M, Shinmachi D, Ono T, Tsuchiya S, Hosoda M, Fujita A, Aoki NP, Watanabe Y, Fujita N, Angata K, Kaji H, Narimatsu H, Okuda S, Aoki-Kinoshita KF. Yamada I, et al. Nat Methods. 2020 Jul;17(7):649-650. doi: 10.1038/s41592-020-0879-8. Nat Methods. 2020. PMID: 32572234 No abstract available.

4

The international glycan repository GlyTouCan version 3.0.

Fujita A, Aoki NP, Shinmachi D, Matsubara M, Tsuchiya S, Shiota M, Ono T, Yamada I, Aoki-Kinoshita KF. Fujita A, et al. Nucleic Acids Res. 2021 Jan 8;49(D1):D1529-D1533. doi: 10.1093/nar/gkaa947. Nucleic Acids Res. 2021. PMID: 33125071 Free PMC article.

5

RDFizing the biosynthetic pathway of E.coli O-antigen to enable semantic sharing of microbiology data.

Lee S, Ono T, Aoki-Kinoshita K. Lee S, et al. BMC Microbiol. 2021 Nov 22;21(1):325. doi: 10.1186/s12866-021-02384-y. BMC Microbiol. 2021. PMID: 34809564 Free PMC article.

6

SugarDrawer: A Web-Based Database Search Tool with Editing Glycan Structures.

Tsuchiya S, Matsubara M, Aoki-Kinoshita KF, Yamada I. Tsuchiya S, et al. Molecules. 2021 Nov 25;26(23):7149. doi: 10.3390/molecules26237149. Molecules. 2021. PMID: 34885724 Free PMC article.

7

Development of a novel monosaccharide substitution matrix for improved comparison of glycan structures.

Fujita A, Aoki-Kinoshita KF. Fujita A, et al. Carbohydr Res. 2022 Jan;511:108496. doi: 10.1016/j.carres.2021.108496. Epub 2022 Jan 4. Carbohydr Res. 2022. PMID: 35030433 Free article.

8

Bridging glycoinformatics and cheminformatics: integration efforts between GlyCosmos and PubChem.

Cheng T, Ono T, Shiota M, Yamada I, Aoki-Kinoshita KF, Bolton EE. Cheng T, et al. Glycobiology. 2023 Jun 21;33(6):454-463. doi: 10.1093/glycob/cwad028. Glycobiology. 2023. PMID: 37129482 Free PMC article.

9

GlyComb: A novel glycoconjugate data repository that bridges glycomics and proteomics.

Takahashi Y, Shiota M, Fujita A, Yamada I, Aoki-Kinoshita KF. Takahashi Y, et al. J Biol Chem. 2024 Feb;300(2):105624. doi: 10.1016/j.jbc.2023.105624. Epub 2024 Jan 3. J Biol Chem. 2024. PMID: 38176651 Free PMC article.

10

Development of an integrated and inferenceable RDF database of glycan, pathogen and disease resources.

Arakawa K, Ono T, Aoki-Kinoshita KF, Yamamoto Y. Arakawa K, et al. Sci Data. 2023 Sep 6;10(1):582. doi: 10.1038/s41597-023-02442-2. Sci Data. 2023. PMID: 37673902 Free PMC article.

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