Gao X - Search Results

1

Metagenomic insights into the resistome, mobilome, and virulome of dogs with diverse lifestyles.

Zhou N, Chen W, Xia L, Li M, Ye H, Lv C, Chen Y, Cheng Z, Park TJ, Ho PL, Gao X, Guo X, Zhao H, Cao H, Zhu Y. Zhou N, et al. Among authors: gao x. Anim Microbiome. 2024 Dec 22;6(1):76. doi: 10.1186/s42523-024-00364-x. Anim Microbiome. 2024. PMID: 39710721 Free PMC article.

2

HMD-ARG: hierarchical multi-task deep learning for annotating antibiotic resistance genes.

Li Y, Xu Z, Han W, Cao H, Umarov R, Yan A, Fan M, Chen H, Duarte CM, Li L, Ho PL, Gao X. Li Y, et al. Among authors: gao x. Microbiome. 2021 Feb 8;9(1):40. doi: 10.1186/s40168-021-01002-3. Microbiome. 2021. PMID: 33557954 Free PMC article.

3

A sensitive repeat identification framework based on short and long reads.

Liao X, Li M, Hu K, Wu FX, Gao X, Wang J. Liao X, et al. Among authors: gao x. Nucleic Acids Res. 2021 Sep 27;49(17):e100. doi: 10.1093/nar/gkab563. Nucleic Acids Res. 2021. PMID: 34214175 Free PMC article.

4

New insights on the cardiovascular effects of IGF-1.

Macvanin M, Gluvic Z, Radovanovic J, Essack M, Gao X, Isenovic ER. Macvanin M, et al. Among authors: gao x. Front Endocrinol (Lausanne). 2023 Feb 9;14:1142644. doi: 10.3389/fendo.2023.1142644. eCollection 2023. Front Endocrinol (Lausanne). 2023. PMID: 36843588 Free PMC article.

5

DrugMGR: a deep bioactive molecule binding method to identify compounds targeting proteins.

Li X, Yang Q, Xu L, Dong W, Luo G, Wang W, Dong S, Wang K, Xuan P, Zhang X, Gao X. Li X, et al. Among authors: gao x. Bioinformatics. 2024 Mar 29;40(4):btae176. doi: 10.1093/bioinformatics/btae176. Bioinformatics. 2024. PMID: 38561176 Free PMC article.

6

MMCL-CDR: enhancing cancer drug response prediction with multi-omics and morphology images contrastive representation learning.

Li Y, Guo Z, Gao X, Wang G. Li Y, et al. Among authors: gao x. Bioinformatics. 2023 Dec 1;39(12):btad734. doi: 10.1093/bioinformatics/btad734. Bioinformatics. 2023. PMID: 38070154 Free PMC article.

7

GeoNet enables the accurate prediction of protein-ligand binding sites through interpretable geometric deep learning.

Han J, Zhang S, Guan M, Li Q, Gao X, Liu J. Han J, et al. Among authors: gao x. Structure. 2024 Dec 5;32(12):2435-2448.e5. doi: 10.1016/j.str.2024.10.011. Epub 2024 Nov 1. Structure. 2024. PMID: 39488202

8

Global surveillance of emerging SARS-CoV-2 variants.

Uludağ M, Incitti R, Gao X, Heeney JL, Gojobori T, Alam I. Uludağ M, et al. Among authors: gao x. Bull World Health Organ. 2024 Jun 1;102(6):374-374A. doi: 10.2471/BLT.22.289528. Bull World Health Organ. 2024. PMID: 38828061 Free PMC article. No abstract available.

9

Optimization of binding affinities in chemical space with generative pre-trained transformer and deep reinforcement learning.

Xu X, Zhou J, Zhu C, Zhan Q, Li Z, Zhang R, Wang Y, Liao X, Gao X. Xu X, et al. Among authors: gao x. F1000Res. 2024 Feb 20;12:757. doi: 10.12688/f1000research.130936.2. eCollection 2023. F1000Res. 2024. PMID: 38434657 Free PMC article.

10

Applications of deep learning in understanding gene regulation.

Li Z, Gao E, Zhou J, Han W, Xu X, Gao X. Li Z, et al. Among authors: gao e, gao x. Cell Rep Methods. 2023 Jan 11;3(1):100384. doi: 10.1016/j.crmeth.2022.100384. eCollection 2023 Jan 23. Cell Rep Methods. 2023. PMID: 36814848 Free PMC article. Review.

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