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Phylogenomic insights into the taxonomy, ecology, and mating systems of the lorchel family Discinaceae (Pezizales, Ascomycota).
Dirks AC, Methven AS, Miller AN, Orozco-Quime M, Maurice S, Bonito G, Van Wyk J, Ahrendt S, Kuo A, Andreopoulos W, Riley R, Lipzen A, Chovatia M, Savage E, Barry K, Grigoriev IV, Bradshaw AJ, Martin FM, Elizabeth Arnold A, James TY. Dirks AC, et al. Among authors: lipzen a. Mol Phylogenet Evol. 2025 Jan 7:108286. doi: 10.1016/j.ympev.2025.108286. Online ahead of print. Mol Phylogenet Evol. 2025. PMID: 39788220
Separation of life stages within anaerobic fungi (Neocallimastigomycota) highlights differences in global transcription and metabolism.
Butkovich LV, Leggieri PA, Lillington SP, Navaratna TA, Swift CL, Malinov NG, Zalunardo TR, Vining OB, Lipzen A, Wang M, Yan J, Ng V, Grigoriev IV, O'Malley MA. Butkovich LV, et al. Among authors: lipzen a. Fungal Genet Biol. 2024 Dec 31;176:103958. doi: 10.1016/j.fgb.2024.103958. Online ahead of print. Fungal Genet Biol. 2024. PMID: 39746393 Free article.
Hydrophobins from Aspergillus mediate fungal interactions with microplastics.
Klauer RR, Silvestri R, White H, Hayes RD, Riley R, Lipzen A, Barry K, Grigoriev IV, Talag J, Bunting V, Stevenson Z, Solomon KV, Blenner M. Klauer RR, et al. Among authors: lipzen a. bioRxiv [Preprint]. 2024 Nov 5:2024.11.05.622132. doi: 10.1101/2024.11.05.622132. bioRxiv. 2024. PMID: 39574658 Free PMC article. Preprint.
Allopolyploidy expanded gene content but not pangenomic variation in the hexaploid oilseed Camelina sativa.
Bird KA, Brock JR, Grabowski PP, Harder AM, Healy AL, Shu S, Barry K, Boston L, Daum C, Guo J, Lipzen A, Walstead R, Grimwood J, Schmutz J, Lu C, Comai L, McKay JK, Pires JC, Edger PP, Lovell JT, Kliebenstein DJ. Bird KA, et al. Among authors: lipzen a. Genetics. 2025 Jan 8;229(1):1-44. doi: 10.1093/genetics/iyae183. Genetics. 2025. PMID: 39545504
Comparative genomic analysis of thermophilic fungi reveals convergent evolutionary adaptations and gene losses.
Steindorff AS, Aguilar-Pontes MV, Robinson AJ, Andreopoulos B, LaButti K, Kuo A, Mondo S, Riley R, Otillar R, Haridas S, Lipzen A, Grimwood J, Schmutz J, Clum A, Reid ID, Moisan MC, Butler G, Nguyen TTM, Dewar K, Conant G, Drula E, Henrissat B, Hansel C, Singer S, Hutchinson MI, de Vries RP, Natvig DO, Powell AJ, Tsang A, Grigoriev IV. Steindorff AS, et al. Among authors: lipzen a. Commun Biol. 2024 Sep 12;7(1):1124. doi: 10.1038/s42003-024-06681-w. Commun Biol. 2024. PMID: 39266695 Free PMC article.
Phyllosticta paracitricarpa is synonymous with the EU quarantine fungus P. citricarpa based on phylogenomic analyses.
van Ingen-Buijs VA, van Westerhoven AC, Skiadas P, Zuijdgeest XCL, Haridas S, Daum C, Duffy K, Guo J, Hundley H, LaButti K, Lipzen A, Pangilinan J, Riley R, Wang J, Yan M, Martin F, Barry K, Grigoriev IV, Groenewald JZ, Crous PW, Seidl MF. van Ingen-Buijs VA, et al. Among authors: lipzen a. Fungal Genet Biol. 2024 Dec;175:103925. doi: 10.1016/j.fgb.2024.103925. Epub 2024 Sep 5. Fungal Genet Biol. 2024. PMID: 39244012 Free article.
230 results