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Application of transfer learning to predict drug-induced human in vivo gene expression changes using rat in vitro and in vivo data.
O'Donovan SD, Cavill R, Wimmenauer F, Lukas A, Stumm T, Smirnov E, Lenz M, Ertaylan G, Jennen DGJ, van Riel NAW, Driessens K, Peeters RLM, de Kok TMCM. O'Donovan SD, et al. Among authors: cavill r. PLoS One. 2023 Nov 30;18(11):e0292030. doi: 10.1371/journal.pone.0292030. eCollection 2023. PLoS One. 2023. PMID: 38032940 Free PMC article.
Identification of a gene network driving the attenuated response to lipopolysaccharide of monocytes from hypertensive coronary artery disease patients.
Lu C, Donners MMPC, de Baaij JBJ, Jin H, Otten JJT, Manca M, van Zonneveld AJ, Jukema JW, Kraaijeveld A, Kuiper J, Pasterkamp G, Mees B, Sluimer JC, Cavill R, Karel JMH, Goossens P, Biessen EAL. Lu C, et al. Among authors: cavill r. Front Immunol. 2024 Feb 12;15:1286382. doi: 10.3389/fimmu.2024.1286382. eCollection 2024. Front Immunol. 2024. PMID: 38410507 Free PMC article.
Sex-specific differences in cytokine signaling pathways in circulating monocytes of cardiovascular disease patients.
Lu C, Donners MMPC, Karel J, de Boer H, van Zonneveld AJ, den Ruijter H, Jukema JW, Kraaijeveld A, Kuiper J, Pasterkamp G, Cavill R, Perales-Patón J, Ferrannini E, Goossens P, Biessen EAL. Lu C, et al. Among authors: cavill r. Atherosclerosis. 2023 Nov;384:117123. doi: 10.1016/j.atherosclerosis.2023.04.005. Epub 2023 Apr 14. Atherosclerosis. 2023. PMID: 37127497 Free article.
Deep embedded clustering generalisability and adaptation for integrating mixed datatypes: two critical care cohorts.
de Kok JWTM, van Rosmalen F, Koeze J, Keus F, van Kuijk SMJ, Castela Forte J, Schnabel RM, Driessen RGH, van Herpt TTW, Sels JEM, Bergmans DCJJ, Lexis CPH, van Doorn WPTM, Meex SJR, Xu M, Borrat X, Cavill R, van der Horst ICC, van Bussel BCT. de Kok JWTM, et al. Among authors: cavill r. Sci Rep. 2024 Jan 10;14(1):1045. doi: 10.1038/s41598-024-51699-z. Sci Rep. 2024. PMID: 38200252 Free PMC article.
Blood-based multivariate methylation risk score for cognitive impairment and dementia.
Koetsier J, Cavill R, Reijnders R, Harvey J, Homann J, Kouhsar M, Deckers K, Köhler S, Eijssen LMT, van den Hove DLA, Demuth I, Düzel S; Alzheimer's Disease Neuroimaging Initiative; Smith RG, Smith AR, Burrage J, Walker EM, Shireby G, Hannon E, Dempster E, Frayling T, Mill J, Dobricic V, Johannsen P, Wittig M, Franke A, Vandenberghe R, Schaeverbeke J, Freund-Levi Y, Frölich L, Scheltens P, Teunissen CE, Frisoni G, Blin O, Richardson JC, Bordet R, Engelborghs S, de Roeck E, Martinez-Lage P, Tainta M, Lleó A, Sala I, Popp J, Peyratout G, Verhey F, Tsolaki M, Andreasson U, Blennow K, Zetterberg H, Streffer J, Vos SJB, Lovestone S, Visser PJ, Lill CM, Bertram L, Lunnon K, Pishva E. Koetsier J, et al. Among authors: cavill r. Alzheimers Dement. 2024 Oct;20(10):6682-6698. doi: 10.1002/alz.14061. Epub 2024 Aug 28. Alzheimers Dement. 2024. PMID: 39193899 Free PMC article.
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