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Metabolomic biomarkers of habitual B vitamin intakes unveil novel differentially methylated positions in the human epigenome.
Costeira R, Evangelista L, Wilson R, Yan X, Hellbach F, Sinke L, Christiansen C, Villicaña S, Masachs OM, Tsai PC, Mangino M, Menni C, Berry SE, Beekman M, van Heemst D, Slagboom PE, Heijmans BT, Suhre K, Kastenmüller G, Gieger C, Peters A, Small KS, Linseisen J, Waldenberger M, Bell JT. Costeira R, et al. Clin Epigenetics. 2023 Oct 19;15(1):166. doi: 10.1186/s13148-023-01578-7. Clin Epigenetics. 2023. PMID: 37858220 Free PMC article.
DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases.
Wielscher M, Mandaviya PR, Kuehnel B, Joehanes R, Mustafa R, Robinson O, Zhang Y, Bodinier B, Walton E, Mishra PP, Schlosser P, Wilson R, Tsai PC, Palaniswamy S, Marioni RE, Fiorito G, Cugliari G, Karhunen V, Ghanbari M, Psaty BM, Loh M, Bis JC, Lehne B, Sotoodehnia N, Deary IJ, Chadeau-Hyam M, Brody JA, Cardona A, Selvin E, Smith AK, Miller AH, Torres MA, Marouli E, Gào X, van Meurs JBJ, Graf-Schindler J, Rathmann W, Koenig W, Peters A, Weninger W, Farlik M, Zhang T, Chen W, Xia Y, Teumer A, Nauck M, Grabe HJ, Doerr M, Lehtimäki T, Guan W, Milani L, Tanaka T, Fisher K, Waite LL, Kasela S, Vineis P, Verweij N, van der Harst P, Iacoviello L, Sacerdote C, Panico S, Krogh V, Tumino R, Tzala E, Matullo G, Hurme MA, Raitakari OT, Colicino E, Baccarelli AA, Kähönen M, Herzig KH, Li S; BIOS consortium; Conneely KN, Kooner JS, Köttgen A, Heijmans BT, Deloukas P, Relton C, Ong KK, Bell JT, Boerwinkle E, Elliott P, Brenner H, Beekman M, Levy D, Waldenberger M, Chambers JC, Dehghan A, Järvelin MR. Wielscher M, et al. Nat Commun. 2022 May 3;13(1):2408. doi: 10.1038/s41467-022-29792-6. Nat Commun. 2022. PMID: 35504910 Free PMC article.
Genetic impacts on DNA methylation help elucidate regulatory genomic processes.
Villicaña S, Castillo-Fernandez J, Hannon E, Christiansen C, Tsai PC, Maddock J, Kuh D, Suderman M, Power C, Relton C, Ploubidis G, Wong A, Hardy R, Goodman A, Ong KK, Bell JT. Villicaña S, et al. Genome Biol. 2023 Jul 31;24(1):176. doi: 10.1186/s13059-023-03011-x. Genome Biol. 2023. PMID: 37525248 Free PMC article.
Dietary and supplemental intake of vitamins C and E is associated with altered DNA methylation in an epigenome-wide association study meta-analysis.
Keshawarz A, Joehanes R, Ma J, Lee GY, Costeira R, Tsai PC, Masachs OM, Bell JT, Wilson R, Thorand B, Winkelmann J, Peters A, Linseisen J, Waldenberger M, Lehtimäki T, Mishra PP, Kähönen M, Raitakari O, Helminen M, Wang CA, Melton PE, Huang RC, Pennell CE, O'Sullivan TA, Ochoa-Rosales C, Voortman T, van Meurs JBJ, Young KL, Graff M, Wang Y, Kiel DP, Smith CE, Jacques PF, Levy D. Keshawarz A, et al. Epigenetics. 2023 Dec;18(1):2211361. doi: 10.1080/15592294.2023.2211361. Epigenetics. 2023. PMID: 37233989 Free PMC article.
Epigenome-wide association meta-analysis of DNA methylation with coffee and tea consumption.
Karabegović I, Portilla-Fernandez E, Li Y, Ma J, Maas SCE, Sun D, Hu EA, Kühnel B, Zhang Y, Ambatipudi S, Fiorito G, Huang J, Castillo-Fernandez JE, Wiggins KL, de Klein N, Grioni S, Swenson BR, Polidoro S, Treur JL, Cuenin C, Tsai PC, Costeira R, Chajes V, Braun K, Verweij N, Kretschmer A, Franke L, van Meurs JBJ, Uitterlinden AG, de Knegt RJ, Ikram MA, Dehghan A, Peters A, Schöttker B, Gharib SA, Sotoodehnia N, Bell JT, Elliott P, Vineis P, Relton C, Herceg Z, Brenner H, Waldenberger M, Rebholz CM, Voortman T, Pan Q, Fornage M, Levy D, Kayser M, Ghanbari M. Karabegović I, et al. Nat Commun. 2021 May 14;12(1):2830. doi: 10.1038/s41467-021-22752-6. Nat Commun. 2021. PMID: 33990564 Free PMC article.
Adipose methylome integrative-omic analyses reveal genetic and dietary metabolic health drivers and insulin resistance classifiers.
Christiansen C, Tomlinson M, Eliot M, Nilsson E, Costeira R, Xia Y, Villicaña S, Mompeo O, Wells P, Castillo-Fernandez J, Potier L, Vohl MC, Tchernof A, Moustafa JE, Menni C, Steves CJ, Kelsey K, Ling C, Grundberg E, Small KS, Bell JT. Christiansen C, et al. Genome Med. 2022 Jul 18;14(1):75. doi: 10.1186/s13073-022-01077-z. Genome Med. 2022. PMID: 35843982 Free PMC article.
Pooled analysis of epigenome-wide association studies of food consumption in KORA, TwinsUK and LLS.
Hellbach F, Sinke L, Costeira R, Baumeister SE, Beekman M, Louca P, Leeming ER, Mompeo O, Berry S, Wilson R, Wawro N, Freuer D, Hauner H, Peters A, Winkelmann J, Koenig W, Meisinger C, Waldenberger M, Heijmans BT, Slagboom PE, Bell JT, Linseisen J. Hellbach F, et al. Eur J Nutr. 2023 Apr;62(3):1357-1375. doi: 10.1007/s00394-022-03074-9. Epub 2022 Dec 26. Eur J Nutr. 2023. PMID: 36571600 Free PMC article.